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Results: 1 to 20 of 106

1.

Protein-guided RNA dynamics during early ribosome assembly.

Kim H, Abeysirigunawarden SC, Chen K, Mayerle M, Ragunathan K, Luthey-Schulten Z, Ha T, Woodson SA.

Nature. 2014 Feb 20;506(7488):334-8. doi: 10.1038/nature13039. Epub 2014 Feb 12.

PMID:
24522531
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

S16 throws a conformational switch during assembly of 30S 5' domain.

Ramaswamy P, Woodson SA.

Nat Struct Mol Biol. 2009 Apr;16(4):438-45. doi: 10.1038/nsmb.1585. Epub 2009 Apr 3.

PMID:
19343072
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Specific contacts between protein S4 and ribosomal RNA are required at multiple stages of ribosome assembly.

Mayerle M, Woodson SA.

RNA. 2013 Apr;19(4):574-85. doi: 10.1261/rna.037028.112. Epub 2013 Feb 21.

PMID:
23431409
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A minimized rRNA-binding site for ribosomal protein S4 and its implications for 30S assembly.

Bellur DL, Woodson SA.

Nucleic Acids Res. 2009 Apr;37(6):1886-96. doi: 10.1093/nar/gkp036. Epub 2009 Feb 3.

PMID:
19190093
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

RNA folding pathways and the self-assembly of ribosomes.

Woodson SA.

Acc Chem Res. 2011 Dec 20;44(12):1312-9. doi: 10.1021/ar2000474. Epub 2011 Jun 29.

PMID:
21714483
[PubMed - indexed for MEDLINE]
6.

Nonbridging phosphate oxygens in 16S rRNA important for 30S subunit assembly and association with the 50S ribosomal subunit.

Ghosh S, Joseph S.

RNA. 2005 May;11(5):657-67. Epub 2005 Apr 5.

PMID:
15811917
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Concurrent nucleation of 16S folding and induced fit in 30S ribosome assembly.

Adilakshmi T, Bellur DL, Woodson SA.

Nature. 2008 Oct 30;455(7217):1268-72. doi: 10.1038/nature07298. Epub 2008 Sep 10.

PMID:
18784650
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Functional role of ribosomal signatures.

Chen K, Eargle J, Sarkar K, Gruebele M, Luthey-Schulten Z.

Biophys J. 2010 Dec 15;99(12):3930-40. doi: 10.1016/j.bpj.2010.09.062.

PMID:
21156135
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Molecular biology: Protein binding cannot subdue a lively RNA.

Hall KB.

Nature. 2014 Feb 20;506(7488):303-4. doi: 10.1038/nature13055. Epub 2014 Feb 12. No abstract available.

PMID:
24522527
[PubMed - indexed for MEDLINE]
10.

Escherichia coli rimM and yjeQ null strains accumulate immature 30S subunits of similar structure and protein complement.

Leong V, Kent M, Jomaa A, Ortega J.

RNA. 2013 Jun;19(6):789-802. doi: 10.1261/rna.037523.112. Epub 2013 Apr 23.

PMID:
23611982
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A three-fluorophore FRET assay for high-throughput screening of small-molecule inhibitors of ribosome assembly.

Klostermeier D, Sears P, Wong CH, Millar DP, Williamson JR.

Nucleic Acids Res. 2004 May 17;32(9):2707-15. Print 2004.

PMID:
15148358
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Differential assembly of 16S rRNA domains during 30S subunit formation.

Xu Z, Culver GM.

RNA. 2010 Oct;16(10):1990-2001. doi: 10.1261/rna.2246710. Epub 2010 Aug 24.

PMID:
20736336
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

In vivo X-ray footprinting of pre-30S ribosomes reveals chaperone-dependent remodeling of late assembly intermediates.

Clatterbuck Soper SF, Dator RP, Limbach PA, Woodson SA.

Mol Cell. 2013 Nov 21;52(4):506-16. doi: 10.1016/j.molcel.2013.09.020. Epub 2013 Oct 24.

PMID:
24207057
[PubMed - indexed for MEDLINE]
14.

Kinetic cooperativity in Escherichia coli 30S ribosomal subunit reconstitution reveals additional complexity in the assembly landscape.

Bunner AE, Beck AH, Williamson JR.

Proc Natl Acad Sci U S A. 2010 Mar 23;107(12):5417-22. doi: 10.1073/pnas.0912007107. Epub 2010 Mar 5.

PMID:
20207951
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

How hibernation factors RMF, HPF, and YfiA turn off protein synthesis.

Polikanov YS, Blaha GM, Steitz TA.

Science. 2012 May 18;336(6083):915-8. doi: 10.1126/science.1218538.

PMID:
22605777
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Ribosome RNA assembly intermediates visualized in living cells.

McGinnis JL, Weeks KM.

Biochemistry. 2014 May 20;53(19):3237-47. doi: 10.1021/bi500198b. Epub 2014 May 12.

PMID:
24818530
[PubMed - indexed for MEDLINE]
17.

RNA-protein interactions in 30S ribosomal subunits: folding and function of 16S rRNA.

Stern S, Powers T, Changchien LM, Noller HF.

Science. 1989 May 19;244(4906):783-90. Review.

PMID:
2658053
[PubMed - indexed for MEDLINE]
18.

Visualizing ribosome biogenesis: parallel assembly pathways for the 30S subunit.

Mulder AM, Yoshioka C, Beck AH, Bunner AE, Milligan RA, Potter CS, Carragher B, Williamson JR.

Science. 2010 Oct 29;330(6004):673-7. doi: 10.1126/science.1193220.

PMID:
21030658
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Structural aspects of RbfA action during small ribosomal subunit assembly.

Datta PP, Wilson DN, Kawazoe M, Swami NK, Kaminishi T, Sharma MR, Booth TM, Takemoto C, Fucini P, Yokoyama S, Agrawal RK.

Mol Cell. 2007 Nov 9;28(3):434-45.

PMID:
17996707
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding.

Dunkle JA, Wang L, Feldman MB, Pulk A, Chen VB, Kapral GJ, Noeske J, Richardson JS, Blanchard SC, Cate JH.

Science. 2011 May 20;332(6032):981-4. doi: 10.1126/science.1202692.

PMID:
21596992
[PubMed - indexed for MEDLINE]
Free PMC Article

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