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Results: 1 to 20 of 104

Similar articles for PubMed (Select 24498936)

1.

Distinct chromatin features characterize different classes of repeat sequences in Drosophila melanogaster.

Krassovsky K, Henikoff S.

BMC Genomics. 2014 Feb 6;15:105. doi: 10.1186/1471-2164-15-105.

2.

A high-resolution whole-genome map of key chromatin modifications in the adult Drosophila melanogaster.

Yin H, Sweeney S, Raha D, Snyder M, Lin H.

PLoS Genet. 2011 Dec;7(12):e1002380. doi: 10.1371/journal.pgen.1002380. Epub 2011 Dec 15.

3.

Mapping and positioning DNA-binding proteins along genomic DNA. Structure of D. melanogaster ribosomal 'Alu-repeats' and 1.688 satellite chromatin.

Belikov SV, Belgovsky AI, Partolina MP, Karpov VL, Mirzabekov AD.

Nucleic Acids Res. 1993 Oct 11;21(20):4796-802.

4.

Drosophila Yemanuclein and HIRA cooperate for de novo assembly of H3.3-containing nucleosomes in the male pronucleus.

Orsi GA, Algazeery A, Meyer RE, Capri M, Sapey-Triomphe LM, Horard B, Gruffat H, Couble P, Aït-Ahmed O, Loppin B.

PLoS Genet. 2013;9(2):e1003285. doi: 10.1371/journal.pgen.1003285. Epub 2013 Feb 7.

5.

Different chromatin interfaces of the Drosophila dosage compensation complex revealed by high-shear ChIP-seq.

Straub T, Zabel A, Gilfillan GD, Feller C, Becker PB.

Genome Res. 2013 Mar;23(3):473-85. doi: 10.1101/gr.146407.112. Epub 2012 Dec 11.

6.
7.

CTCF-dependent chromatin boundary element between the latency-associated transcript and ICP0 promoters in the herpes simplex virus type 1 genome.

Chen Q, Lin L, Smith S, Huang J, Berger SL, Zhou J.

J Virol. 2007 May;81(10):5192-201. Epub 2007 Jan 31.

8.

Remodelers organize cellular chromatin by counteracting intrinsic histone-DNA sequence preferences in a class-specific manner.

Moshkin YM, Chalkley GE, Kan TW, Reddy BA, Ozgur Z, van Ijcken WF, Dekkers DH, Demmers JA, Travers AA, Verrijzer CP.

Mol Cell Biol. 2012 Feb;32(3):675-88. doi: 10.1128/MCB.06365-11. Epub 2011 Nov 28.

10.

The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote.

Schübeler D, MacAlpine DM, Scalzo D, Wirbelauer C, Kooperberg C, van Leeuwen F, Gottschling DE, O'Neill LP, Turner BM, Delrow J, Bell SP, Groudine M.

Genes Dev. 2004 Jun 1;18(11):1263-71.

11.

Characterization of H3K9me3- and H4K20me3-associated circulating nucleosomal DNA by high-throughput sequencing in colorectal cancer.

Gezer U, Ustek D, Yörüker EE, Cakiris A, Abaci N, Leszinski G, Dalay N, Holdenrieder S.

Tumour Biol. 2013 Feb;34(1):329-36. doi: 10.1007/s13277-012-0554-5. Epub 2012 Oct 20.

PMID:
23086575
12.

The essential role of Drosophila HIRA for de novo assembly of paternal chromatin at fertilization.

Bonnefoy E, Orsi GA, Couble P, Loppin B.

PLoS Genet. 2007 Oct;3(10):1991-2006. Epub 2007 Sep 10.

13.

Comparative analysis of metazoan chromatin organization.

Ho JW, Jung YL, Liu T, Alver BH, Lee S, Ikegami K, Sohn KA, Minoda A, Tolstorukov MY, Appert A, Parker SC, Gu T, Kundaje A, Riddle NC, Bishop E, Egelhofer TA, Hu SS, Alekseyenko AA, Rechtsteiner A, Asker D, Belsky JA, Bowman SK, Chen QB, Chen RA, Day DS, Dong Y, Dose AC, Duan X, Epstein CB, Ercan S, Feingold EA, Ferrari F, Garrigues JM, Gehlenborg N, Good PJ, Haseley P, He D, Herrmann M, Hoffman MM, Jeffers TE, Kharchenko PV, Kolasinska-Zwierz P, Kotwaliwale CV, Kumar N, Langley SA, Larschan EN, Latorre I, Libbrecht MW, Lin X, Park R, Pazin MJ, Pham HN, Plachetka A, Qin B, Schwartz YB, Shoresh N, Stempor P, Vielle A, Wang C, Whittle CM, Xue H, Kingston RE, Kim JH, Bernstein BE, Dernburg AF, Pirrotta V, Kuroda MI, Noble WS, Tullius TD, Kellis M, MacAlpine DM, Strome S, Elgin SC, Liu XS, Lieb JD, Ahringer J, Karpen GH, Park PJ.

Nature. 2014 Aug 28;512(7515):449-52. doi: 10.1038/nature13415.

14.

Adaptive evolution of Cid, a centromere-specific histone in Drosophila.

Malik HS, Henikoff S.

Genetics. 2001 Mar;157(3):1293-8.

15.

Molecular landscape of modified histones in Drosophila heterochromatic genes and euchromatin-heterochromatin transition zones.

Yasuhara JC, Wakimoto BT.

PLoS Genet. 2008 Jan;4(1):e16. doi: 10.1371/journal.pgen.0040016. Epub 2007 Dec 13.

16.

Transition from a nucleosome-based to a protamine-based chromatin configuration during spermiogenesis in Drosophila.

Rathke C, Baarends WM, Jayaramaiah-Raja S, Bartkuhn M, Renkawitz R, Renkawitz-Pohl R.

J Cell Sci. 2007 May 1;120(Pt 9):1689-700.

17.

Epigenetic modification of centromeric chromatin: hypomethylation of DNA sequences in the CENH3-associated chromatin in Arabidopsis thaliana and maize.

Zhang W, Lee HR, Koo DH, Jiang J.

Plant Cell. 2008 Jan;20(1):25-34. doi: 10.1105/tpc.107.057083. Epub 2008 Jan 31.

18.

Clustered ChIP-Seq-defined transcription factor binding sites and histone modifications map distinct classes of regulatory elements.

Rye M, Sætrom P, Håndstad T, Drabløs F.

BMC Biol. 2011 Nov 24;9:80. doi: 10.1186/1741-7007-9-80.

19.

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster.

Kharchenko PV, Alekseyenko AA, Schwartz YB, Minoda A, Riddle NC, Ernst J, Sabo PJ, Larschan E, Gorchakov AA, Gu T, Linder-Basso D, Plachetka A, Shanower G, Tolstorukov MY, Luquette LJ, Xi R, Jung YL, Park RW, Bishop EP, Canfield TK, Sandstrom R, Thurman RE, MacAlpine DM, Stamatoyannopoulos JA, Kellis M, Elgin SC, Kuroda MI, Pirrotta V, Karpen GH, Park PJ.

Nature. 2011 Mar 24;471(7339):480-5. doi: 10.1038/nature09725. Epub 2010 Dec 22.

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