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Results: 1 to 20 of 97

1.

Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre.

Hacisuleyman E, Goff LA, Trapnell C, Williams A, Henao-Mejia J, Sun L, McClanahan P, Hendrickson DG, Sauvageau M, Kelley DR, Morse M, Engreitz J, Lander ES, Guttman M, Lodish HF, Flavell R, Raj A, Rinn JL.

Nat Struct Mol Biol. 2014 Feb;21(2):198-206. doi: 10.1038/nsmb.2764. Epub 2014 Jan 26.

PMID:
24463464
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Gathering around Firre.

Nakagawa S, Hirano T.

Nat Struct Mol Biol. 2014 Mar;21(3):207-8. doi: 10.1038/nsmb.2782.

PMID:
24599247
[PubMed - indexed for MEDLINE]
3.

The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome.

Engreitz JM, Pandya-Jones A, McDonel P, Shishkin A, Sirokman K, Surka C, Kadri S, Xing J, Goren A, Lander ES, Plath K, Guttman M.

Science. 2013 Aug 16;341(6147):1237973. doi: 10.1126/science.1237973. Epub 2013 Jul 4.

PMID:
23828888
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Roles of long noncoding RNAs in brain development, functional diversification and neurodegenerative diseases.

Wu P, Zuo X, Deng H, Liu X, Liu L, Ji A.

Brain Res Bull. 2013 Aug;97:69-80. doi: 10.1016/j.brainresbull.2013.06.001. Epub 2013 Jun 10. Review.

PMID:
23756188
[PubMed - indexed for MEDLINE]
5.

Long non-coding RNA identification over mouse brain development by integrative modeling of chromatin and genomic features.

Lv J, Liu H, Huang Z, Su J, He H, Xiu Y, Zhang Y, Wu Q.

Nucleic Acids Res. 2013 Dec;41(22):10044-61. doi: 10.1093/nar/gkt818. Epub 2013 Sep 13.

PMID:
24038472
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs.

Johnson R, Guigó R.

RNA. 2014 Jul;20(7):959-76. doi: 10.1261/rna.044560.114. Epub 2014 May 21.

PMID:
24850885
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

High-resolution analysis of epigenetic changes associated with X inactivation.

Marks H, Chow JC, Denissov S, Françoijs KJ, Brockdorff N, Heard E, Stunnenberg HG.

Genome Res. 2009 Aug;19(8):1361-73. doi: 10.1101/gr.092643.109. Epub 2009 Jul 6.

PMID:
19581487
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Sizing up long non-coding RNAs: do lncRNAs have secondary and tertiary structure?

Novikova IV, Hennelly SP, Sanbonmatsu KY.

Bioarchitecture. 2012 Nov-Dec;2(6):189-99. doi: 10.4161/bioa.22592. Review.

PMID:
23267412
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Long non-coding RNAs and human X-chromosome regulation: a coat for the active X chromosome.

Vallot C, Rougeulle C.

RNA Biol. 2013 Aug 1;10(8):1262-5. doi: 10.4161/rna.25802. Epub 2013 Jul 19.

PMID:
23948700
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Evolutionary conservation of long non-coding RNAs; sequence, structure, function.

Johnsson P, Lipovich L, Grandér D, Morris KV.

Biochim Biophys Acta. 2014 Mar;1840(3):1063-71. doi: 10.1016/j.bbagen.2013.10.035. Epub 2013 Oct 27. Review.

PMID:
24184936
[PubMed - indexed for MEDLINE]
11.

High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation.

Simon MD, Pinter SF, Fang R, Sarma K, Rutenberg-Schoenberg M, Bowman SK, Kesner BA, Maier VK, Kingston RE, Lee JT.

Nature. 2013 Dec 19;504(7480):465-9. doi: 10.1038/nature12719. Epub 2013 Oct 27.

PMID:
24162848
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Expression analysis and in silico characterization of intronic long noncoding RNAs in renal cell carcinoma: emerging functional associations.

Fachel AA, Tahira AC, Vilella-Arias SA, Maracaja-Coutinho V, Gimba ER, Vignal GM, Campos FS, Reis EM, Verjovski-Almeida S.

Mol Cancer. 2013 Nov 15;12(1):140. doi: 10.1186/1476-4598-12-140.

PMID:
24238219
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Systematic transcriptome wide analysis of lncRNA-miRNA interactions.

Jalali S, Bhartiya D, Lalwani MK, Sivasubbu S, Scaria V.

PLoS One. 2013;8(2):e53823. doi: 10.1371/journal.pone.0053823. Epub 2013 Feb 6.

PMID:
23405074
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The long non-coding RNA Paupar regulates the expression of both local and distal genes.

Vance KW, Sansom SN, Lee S, Chalei V, Kong L, Cooper SE, Oliver PL, Ponting CP.

EMBO J. 2014 Feb 18;33(4):296-311. doi: 10.1002/embj.201386225. Epub 2014 Feb 1.

PMID:
24488179
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Long noncoding RNAs: Novel insights into hepatocelluar carcinoma.

He Y, Meng XM, Huang C, Wu BM, Zhang L, Lv XW, Li J.

Cancer Lett. 2014 Mar 1;344(1):20-7. doi: 10.1016/j.canlet.2013.10.021. Epub 2013 Oct 30. Review.

PMID:
24183851
[PubMed - indexed for MEDLINE]
16.

Transcriptional regulatory functions of nuclear long noncoding RNAs.

Vance KW, Ponting CP.

Trends Genet. 2014 Aug;30(8):348-355. doi: 10.1016/j.tig.2014.06.001. Epub 2014 Jun 25. Review.

PMID:
24974018
[PubMed - as supplied by publisher]
Free PMC Article
17.

Jpx RNA activates Xist by evicting CTCF.

Sun S, Del Rosario BC, Szanto A, Ogawa Y, Jeon Y, Lee JT.

Cell. 2013 Jun 20;153(7):1537-51. doi: 10.1016/j.cell.2013.05.028.

PMID:
23791181
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Spatial partitioning of the regulatory landscape of the X-inactivation centre.

Nora EP, Lajoie BR, Schulz EG, Giorgetti L, Okamoto I, Servant N, Piolot T, van Berkum NL, Meisig J, Sedat J, Gribnau J, Barillot E, Blüthgen N, Dekker J, Heard E.

Nature. 2012 Apr 11;485(7398):381-5. doi: 10.1038/nature11049.

PMID:
22495304
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis.

Maamar H, Cabili MN, Rinn J, Raj A.

Genes Dev. 2013 Jun 1;27(11):1260-71. doi: 10.1101/gad.217018.113. Epub 2013 May 30.

PMID:
23723417
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification.

Quinn JJ, Ilik IA, Qu K, Georgiev P, Chu C, Akhtar A, Chang HY.

Nat Biotechnol. 2014 Jul 6. doi: 10.1038/nbt.2943. [Epub ahead of print]

PMID:
24997788
[PubMed - as supplied by publisher]

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