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Results: 1 to 20 of 112

1.

A modular computational framework for automated peak extraction from ion mobility spectra.

D'Addario M, Kopczynski D, Baumbach JI, Rahmann S.

BMC Bioinformatics. 2014 Jan 22;15:25. doi: 10.1186/1471-2105-15-25.

PMID:
24450533
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

An integrative clinical database and diagnostics platform for biomarker identification and analysis in ion mobility spectra of human exhaled air.

Schneider T, Hauschild AC, Baumbach JI, Baumbach J.

J Integr Bioinform. 2013 Apr 2;10(2):218. doi: 10.2390/biecoll-jib-2013-218.

PMID:
23545212
[PubMed - indexed for MEDLINE]
3.

Ion mobility spectrometry for the detection of volatile organic compounds in exhaled breath of patients with lung cancer: results of a pilot study.

Westhoff M, Litterst P, Freitag L, Urfer W, Bader S, Baumbach JI.

Thorax. 2009 Sep;64(9):744-8. doi: 10.1136/thx.2008.099465. Epub 2009 Jan 21.

PMID:
19158121
[PubMed - indexed for MEDLINE]
4.

Computational methods for metabolomic data analysis of ion mobility spectrometry data-reviewing the state of the art.

Hauschild AC, Schneider T, Pauling J, Rupp K, Jang M, Baumbach JI, Baumbach J.

Metabolites. 2012 Oct 16;2(4):733-55. doi: 10.3390/metabo2040733.

PMID:
24957760
[PubMed]
Free PMC Article
5.

Multi-capillary column-ion mobility spectrometer (MCC-IMS) breath analysis in ventilated rats: a model with the feasibility of long-term measurements.

Wolf A, Baumbach JI, Kleber A, Maurer F, Maddula S, Favrod P, Jang M, Fink T, Volk T, Kreuer S.

J Breath Res. 2014 Mar;8(1):016006. doi: 10.1088/1752-7155/8/1/016006. Epub 2014 Feb 24.

PMID:
24566204
[PubMed - indexed for MEDLINE]
6.

MCC/IMS signals in human breath related to sarcoidosis-results of a feasibility study using an automated peak finding procedure.

Bunkowski A, Bödeker B, Bader S, Westhoff M, Litterst P, Baumbach JI.

J Breath Res. 2009 Dec;3(4):046001. doi: 10.1088/1752-7155/3/4/046001. Epub 2009 Sep 23.

PMID:
21386194
[PubMed]
7.

Ion mobility spectrometry for microbial volatile organic compounds: a new identification tool for human pathogenic bacteria.

Jünger M, Vautz W, Kuhns M, Hofmann L, Ulbricht S, Baumbach JI, Quintel M, Perl T.

Appl Microbiol Biotechnol. 2012 Mar;93(6):2603-14. doi: 10.1007/s00253-012-3924-4. Epub 2012 Feb 12.

PMID:
22327321
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Peak assignment in multi-capillary column-ion mobility spectrometry using comparative studies with gas chromatography-mass spectrometry for VOC analysis.

Jünger M, Bödeker B, Baumbach JI.

Anal Bioanal Chem. 2010 Jan;396(1):471-82. doi: 10.1007/s00216-009-3168-z. Epub 2009 Oct 18.

PMID:
19838827
[PubMed - indexed for MEDLINE]
9.

Alignment of retention time obtained from multicapillary column gas chromatography used for VOC analysis with ion mobility spectrometry.

Perl T, Bödeker B, Jünger M, Nolte J, Vautz W.

Anal Bioanal Chem. 2010 Jul;397(6):2385-94. doi: 10.1007/s00216-010-3798-1. Epub 2010 May 30.

PMID:
20512565
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Detection of characteristic metabolites of Aspergillus fumigatus and Candida species using ion mobility spectrometry-metabolic profiling by volatile organic compounds.

Perl T, Jünger M, Vautz W, Nolte J, Kuhns M, Borg-von Zepelin M, Quintel M.

Mycoses. 2011 Nov;54(6):e828-37. doi: 10.1111/j.1439-0507.2011.02037.x. Epub 2011 Jun 12.

PMID:
21668516
[PubMed - indexed for MEDLINE]
11.

Detection and validation of volatile metabolic patterns over different strains of two human pathogenic bacteria during their growth in a complex medium using multi-capillary column-ion mobility spectrometry (MCC-IMS).

Kunze N, Göpel J, Kuhns M, Jünger M, Quintel M, Perl T.

Appl Microbiol Biotechnol. 2013 Apr;97(8):3665-76. doi: 10.1007/s00253-013-4762-8. Epub 2013 Mar 7.

PMID:
23467822
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Integrated statistical learning of metabolic ion mobility spectrometry profiles for pulmonary disease identification.

Hauschild AC, Baumbach JI, Baumbach J.

Genet Mol Res. 2012 Aug 16;11(3):2733-44. doi: 10.4238/2012.July.10.17.

PMID:
22869082
[PubMed - indexed for MEDLINE]
13.

The volatile compound BinBase mass spectral database.

Skogerson K, Wohlgemuth G, Barupal DK, Fiehn O.

BMC Bioinformatics. 2011 Aug 4;12:321. doi: 10.1186/1471-2105-12-321.

PMID:
21816034
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Detection of volatile metabolites of Escherichia coli by multi capillary column coupled ion mobility spectrometry.

Maddula S, Blank LM, Schmid A, Baumbach JI.

Anal Bioanal Chem. 2009 Jun;394(3):791-800. doi: 10.1007/s00216-009-2758-0. Epub 2009 Mar 29.

PMID:
19330511
[PubMed - indexed for MEDLINE]
15.

Peak detection method evaluation for ion mobility spectrometry by using machine learning approaches.

Hauschild AC, Kopczynski D, D'Addario M, Baumbach JI, Rahmann S, Baumbach J.

Metabolites. 2013 Apr 16;3(2):277-93. doi: 10.3390/metabo3020277.

PMID:
24957992
[PubMed]
Free PMC Article
16.

Ion mobility spectrometry for pharmacokinetic studies--exemplary application.

Ruzsanyi V.

J Breath Res. 2013 Dec;7(4):046008. doi: 10.1088/1752-7155/7/4/046008. Epub 2013 Nov 28.

PMID:
24287589
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Modular, scriptable and automated analysis tools for high-throughput peptide mass fingerprinting.

Samuelsson J, Dalevi D, Levander F, Rögnvaldsson T.

Bioinformatics. 2004 Dec 12;20(18):3628-35. Epub 2004 Aug 5.

PMID:
15297302
[PubMed - indexed for MEDLINE]
Free Article
18.

Evidence of endogenous volatile organic compounds as biomarkers of diseases in alveolar breath.

Sarbach C, Stevens P, Whiting J, Puget P, Humbert M, Cohen-Kaminsky S, Postaire E.

Ann Pharm Fr. 2013 Jul;71(4):203-15. doi: 10.1016/j.pharma.2013.05.002. Epub 2013 Jun 17. Review.

PMID:
23835018
[PubMed - indexed for MEDLINE]
19.

Ion mobility spectrometry in breath research.

Fink T, Baumbach JI, Kreuer S.

J Breath Res. 2014 Jun;8(2):027104. doi: 10.1088/1752-7155/8/2/027104. Epub 2014 Mar 28. Review.

PMID:
24682214
[PubMed - indexed for MEDLINE]
20.

Computational framework to support integration of biomolecular and clinical data within a translational approach.

Miyoshi NS, Pinheiro DG, Silva WA Jr, Felipe JC.

BMC Bioinformatics. 2013 Jun 6;14:180. doi: 10.1186/1471-2105-14-180.

PMID:
23742129
[PubMed - indexed for MEDLINE]
Free PMC Article

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