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Results: 1 to 20 of 115

1.

New technologies for ultrahigh-throughput genotyping in plant taxonomy.

Edwards D, Zander M, Dalton-Morgan J, Batley J.

Methods Mol Biol. 2014;1115:151-75. doi: 10.1007/978-1-62703-767-9_8.

PMID:
24415474
[PubMed - indexed for MEDLINE]
2.

New technologies for ultra-high throughput genotyping in plants.

Appleby N, Edwards D, Batley J.

Methods Mol Biol. 2009;513:19-39. doi: 10.1007/978-1-59745-427-8_2. Review.

PMID:
19347650
[PubMed - indexed for MEDLINE]
3.

Application of next-generation sequencing for rapid marker development in molecular plant breeding: a case study on anthracnose disease resistance in Lupinus angustifolius L.

Yang H, Tao Y, Zheng Z, Li C, Sweetingham MW, Howieson JG.

BMC Genomics. 2012 Jul 17;13:318. doi: 10.1186/1471-2164-13-318.

PMID:
22805587
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

High throughput SNP discovery and genotyping in grapevine (Vitis vinifera L.) by combining a re-sequencing approach and SNPlex technology.

Lijavetzky D, Cabezas JA, Ibáñez A, Rodríguez V, Martínez-Zapater JM.

BMC Genomics. 2007 Nov 19;8:424.

PMID:
18021442
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

High-throughput SNP discovery and genotyping for constructing a saturated linkage map of chickpea (Cicer arietinum L.).

Gaur R, Azam S, Jeena G, Khan AW, Choudhary S, Jain M, Yadav G, Tyagi AK, Chattopadhyay D, Bhatia S.

DNA Res. 2012 Oct;19(5):357-73. doi: 10.1093/dnares/dss018. Epub 2012 Aug 3.

PMID:
22864163
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Sequence-based SNP genotyping in durum wheat.

van Poecke RM, Maccaferri M, Tang J, Truong HT, Janssen A, van Orsouw NJ, Salvi S, Sanguineti MC, Tuberosa R, van der Vossen EA.

Plant Biotechnol J. 2013 Sep;11(7):809-17. doi: 10.1111/pbi.12072. Epub 2013 May 3.

PMID:
23639032
[PubMed - indexed for MEDLINE]
7.

Large SNP arrays for genotyping in crop plants.

Ganal MW, Polley A, Graner EM, Plieske J, Wieseke R, Luerssen H, Durstewitz G.

J Biosci. 2012 Nov;37(5):821-8. Review.

PMID:
23107918
[PubMed - indexed for MEDLINE]
Free Article
8.

High-throughput SNP discovery and genotyping in durum wheat (Triticum durum Desf.).

Trebbi D, Maccaferri M, de Heer P, Sørensen A, Giuliani S, Salvi S, Sanguineti MC, Massi A, van der Vossen EA, Tuberosa R.

Theor Appl Genet. 2011 Aug;123(4):555-69. doi: 10.1007/s00122-011-1607-7. Epub 2011 May 25.

PMID:
21611761
[PubMed - indexed for MEDLINE]
9.

Reference-free SNP calling: improved accuracy by preventing incorrect calls from repetitive genomic regions.

Dou J, Zhao X, Fu X, Jiao W, Wang N, Zhang L, Hu X, Wang S, Bao Z.

Biol Direct. 2012 Jun 8;7:17. doi: 10.1186/1745-6150-7-17.

PMID:
22682067
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Genome-wide SNP identification in multiple morphotypes of allohexaploid tall fescue (Festuca arundinacea Schreb).

Hand ML, Cogan NO, Forster JW.

BMC Genomics. 2012 Jun 6;13:219.

PMID:
22672128
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects.

Dereeper A, Nicolas S, Le Cunff L, Bacilieri R, Doligez A, Peros JP, Ruiz M, This P.

BMC Bioinformatics. 2011 May 5;12:134. doi: 10.1186/1471-2105-12-134.

PMID:
21545712
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Mining for SNPs and SSRs using SNPServer, dbSNP and SSR taxonomy tree.

Batley J, Edwards D.

Methods Mol Biol. 2009;537:303-21. doi: 10.1007/978-1-59745-251-9_15.

PMID:
19378151
[PubMed - indexed for MEDLINE]
13.

Mitochondrial genome and plant taxonomy.

Duminil J.

Methods Mol Biol. 2014;1115:121-40. doi: 10.1007/978-1-62703-767-9_6.

PMID:
24415472
[PubMed - indexed for MEDLINE]
14.

Automated discovery of single nucleotide polymorphism and simple sequence repeat molecular genetic markers.

Batley J, Jewell E, Edwards D.

Methods Mol Biol. 2007;406:473-94.

PMID:
18287708
[PubMed - indexed for MEDLINE]
15.

SNP discovery by high-throughput sequencing in soybean.

Wu X, Ren C, Joshi T, Vuong T, Xu D, Nguyen HT.

BMC Genomics. 2010 Aug 11;11:469. doi: 10.1186/1471-2164-11-469.

PMID:
20701770
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

SNP marker discovery, linkage map construction and identification of QTLs for enhanced salinity tolerance in field pea (Pisum sativum L.).

Leonforte A, Sudheesh S, Cogan NO, Salisbury PA, Nicolas ME, Materne M, Forster JW, Kaur S.

BMC Plant Biol. 2013 Oct 17;13:161. doi: 10.1186/1471-2229-13-161.

PMID:
24134188
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Sequence-based genotyping for marker discovery and co-dominant scoring in germplasm and populations.

Truong HT, Ramos AM, Yalcin F, de Ruiter M, van der Poel HJ, Huvenaars KH, Hogers RC, van Enckevort LJ, Janssen A, van Orsouw NJ, van Eijk MJ.

PLoS One. 2012;7(5):e37565. doi: 10.1371/journal.pone.0037565. Epub 2012 May 25.

PMID:
22662172
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

High-throughput single nucleotide polymorphism genotyping in wheat (Triticum spp.).

Bérard A, Le Paslier MC, Dardevet M, Exbrayat-Vinson F, Bonnin I, Cenci A, Haudry A, Brunel D, Ravel C.

Plant Biotechnol J. 2009 May;7(4):364-74. doi: 10.1111/j.1467-7652.2009.00404.x.

PMID:
19379285
[PubMed - indexed for MEDLINE]
19.

A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome.

Ganal MW, Durstewitz G, Polley A, Bérard A, Buckler ES, Charcosset A, Clarke JD, Graner EM, Hansen M, Joets J, Le Paslier MC, McMullen MD, Montalent P, Rose M, Schön CC, Sun Q, Walter H, Martin OC, Falque M.

PLoS One. 2011;6(12):e28334. doi: 10.1371/journal.pone.0028334. Epub 2011 Dec 8.

PMID:
22174790
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology.

Oliver RE, Lazo GR, Lutz JD, Rubenfield MJ, Tinker NA, Anderson JM, Wisniewski Morehead NH, Adhikary D, Jellen EN, Maughan PJ, Brown Guedira GL, Chao S, Beattie AD, Carson ML, Rines HW, Obert DE, Bonman JM, Jackson EW.

BMC Genomics. 2011 Jan 27;12:77. doi: 10.1186/1471-2164-12-77.

PMID:
21272354
[PubMed - indexed for MEDLINE]
Free PMC Article
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