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Results: 1 to 20 of 103

1.

Recursive genomewide recombination and sequencing reveals a key refinement step in the evolution of a metabolic innovation in Escherichia coli.

Quandt EM, Deatherage DE, Ellington AD, Georgiou G, Barrick JE.

Proc Natl Acad Sci U S A. 2014 Feb 11;111(6):2217-22. doi: 10.1073/pnas.1314561111. Epub 2013 Dec 30.

PMID:
24379390
[PubMed - indexed for MEDLINE]
2.

Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli.

Blount ZD, Borland CZ, Lenski RE.

Proc Natl Acad Sci U S A. 2008 Jun 10;105(23):7899-906. doi: 10.1073/pnas.0803151105. Epub 2008 Jun 4.

PMID:
18524956
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genomic analysis of a key innovation in an experimental Escherichia coli population.

Blount ZD, Barrick JE, Davidson CJ, Lenski RE.

Nature. 2012 Sep 27;489(7417):513-8. doi: 10.1038/nature11514. Epub 2012 Sep 19.

PMID:
22992527
[PubMed - indexed for MEDLINE]
Free PMC Article
4.
5.

Inactivation and regulation of the aerobic C(4)-dicarboxylate transport (dctA) gene of Escherichia coli.

Davies SJ, Golby P, Omrani D, Broad SA, Harrington VL, Guest JR, Kelly DJ, Andrews SC.

J Bacteriol. 1999 Sep;181(18):5624-35.

PMID:
10482502
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genome evolution and adaptation in a long-term experiment with Escherichia coli.

Barrick JE, Yu DS, Yoon SH, Jeong H, Oh TK, Schneider D, Lenski RE, Kim JF.

Nature. 2009 Oct 29;461(7268):1243-7. doi: 10.1038/nature08480. Epub 2009 Oct 18.

PMID:
19838166
[PubMed - indexed for MEDLINE]
8.

DctA- and Dcu-independent transport of succinate in Escherichia coli: contribution of diffusion and of alternative carriers.

Janausch IG, Kim OB, Unden G.

Arch Microbiol. 2001 Sep;176(3):224-30.

PMID:
11511871
[PubMed - indexed for MEDLINE]
9.

Adaptive evolution of the lactose utilization network in experimentally evolved populations of Escherichia coli.

Quan S, Ray JC, Kwota Z, Duong T, Balázsi G, Cooper TF, Monds RD.

PLoS Genet. 2012 Jan;8(1):e1002444. doi: 10.1371/journal.pgen.1002444. Epub 2012 Jan 12.

PMID:
22253602
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Multiple long-term, experimentally-evolved populations of Escherichia coli acquire dependence upon citrate as an iron chelator for optimal growth on glucose.

Leiby N, Harcombe WR, Marx CJ.

BMC Evol Biol. 2012 Aug 21;12:151. doi: 10.1186/1471-2148-12-151.

PMID:
22909317
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

The predictability of molecular evolution during functional innovation.

Blank D, Wolf L, Ackermann M, Silander OK.

Proc Natl Acad Sci U S A. 2014 Feb 25;111(8):3044-9. doi: 10.1073/pnas.1318797111. Epub 2014 Feb 10.

PMID:
24516157
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Tricarboxylate transport in a Cit+ Escherichia coli: evidence for the role of an outer membrane protein.

Tomás JM, Kay WW.

Can J Microbiol. 1984 Jul;30(7):916-21.

PMID:
6383581
[PubMed - indexed for MEDLINE]
13.

Repeatability and contingency in the evolution of a key innovation in phage lambda.

Meyer JR, Dobias DT, Weitz JS, Barrick JE, Quick RT, Lenski RE.

Science. 2012 Jan 27;335(6067):428-32. doi: 10.1126/science.1214449.

PMID:
22282803
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Expression profiles reveal parallel evolution of epistatic interactions involving the CRP regulon in Escherichia coli.

Cooper TF, Remold SK, Lenski RE, Schneider D.

PLoS Genet. 2008 Feb;4(2):e35. doi: 10.1371/journal.pgen.0040035.

PMID:
18282111
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Genome-wide mutational diversity in an evolving population of Escherichia coli.

Barrick JE, Lenski RE.

Cold Spring Harb Symp Quant Biol. 2009;74:119-29. doi: 10.1101/sqb.2009.74.018. Epub 2009 Sep 23.

PMID:
19776167
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The impact of interspecific competition on lineage evolution and a rapid peak shift by interdemic genetic mixing in experimental bacterial populations.

Nakajima T.

Biosystems. 2012 Apr-Jun;108(1-3):34-44. doi: 10.1016/j.biosystems.2012.01.001. Epub 2012 Jan 9.

PMID:
22245315
[PubMed - indexed for MEDLINE]
17.

Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12.

Ferenci T, Zhou Z, Betteridge T, Ren Y, Liu Y, Feng L, Reeves PR, Wang L.

J Bacteriol. 2009 Jun;191(12):4025-9. doi: 10.1128/JB.00118-09. Epub 2009 Apr 17.

PMID:
19376874
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Utilization of orotate as a pyrimidine source by Salmonella typhimurium and Escherichia coli requires the dicarboxylate transport protein encoded by dctA.

Baker KE, Ditullio KP, Neuhard J, Kelln RA.

J Bacteriol. 1996 Dec;178(24):7099-105.

PMID:
8955389
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Parallel changes in gene expression after 20,000 generations of evolution in Escherichiacoli.

Cooper TF, Rozen DE, Lenski RE.

Proc Natl Acad Sci U S A. 2003 Feb 4;100(3):1072-7. Epub 2003 Jan 21.

PMID:
12538876
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Genetic and molecular studies of the regulation of atypical citrate utilization and variable Vi antigen expression in enteric bacteria.

Baron LS, Kopecko DJ, McCowen SM, Snellings NJ, Johnson EM, Reid WC, Life CA.

Basic Life Sci. 1982;19:175-94.

PMID:
7039598
[PubMed - indexed for MEDLINE]

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