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Results: 1 to 20 of 86

1.

Finally! The structural secrets of a HD-GYP phosphodiesterase revealed.

Wigren E, Liang ZX, Römling U.

Mol Microbiol. 2014 Jan;91(1):1-5. doi: 10.1111/mmi.12463. Epub 2013 Dec 1.

PMID:
24236493
[PubMed - in process]
2.

Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.

Bellini D, Caly DL, McCarthy Y, Bumann M, An SQ, Dow JM, Ryan RP, Walsh MA.

Mol Microbiol. 2014 Jan;91(1):26-38. doi: 10.1111/mmi.12447. Epub 2013 Nov 24.

PMID:
24176013
[PubMed - in process]
3.

The structure of an unconventional HD-GYP protein from Bdellovibrio reveals the roles of conserved residues in this class of cyclic-di-GMP phosphodiesterases.

Lovering AL, Capeness MJ, Lambert C, Hobley L, Sockett RE.

MBio. 2011 Oct 11;2(5). pii: e00163-11. doi: 10.1128/mBio.00163-11. Print 2011.

PMID:
21990613
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

An HD-GYP cyclic di-guanosine monophosphate phosphodiesterase with a non-heme diiron-carboxylate active site.

Miner KD, Klose KE, Kurtz DM Jr.

Biochemistry. 2013 Aug 13;52(32):5329-31. doi: 10.1021/bi4009215. Epub 2013 Jul 29.

PMID:
23883166
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Comprehensive overexpression analysis of cyclic-di-GMP signalling proteins in the phytopathogen Pectobacterium atrosepticum reveals diverse effects on motility and virulence phenotypes.

Tan H, West JA, Ramsay JP, Monson RE, Griffin JL, Toth IK, Salmond GP.

Microbiology. 2014 Jul;160(Pt 7):1427-39. doi: 10.1099/mic.0.076828-0. Epub 2014 Apr 23.

PMID:
24760967
[PubMed - in process]
6.

C-di-GMP hydrolysis by Pseudomonas aeruginosa HD-GYP phosphodiesterases: analysis of the reaction mechanism and novel roles for pGpG.

Stelitano V, Giardina G, Paiardini A, Castiglione N, Cutruzzolà F, Rinaldo S.

PLoS One. 2013 Sep 16;8(9):e74920. doi: 10.1371/journal.pone.0074920. eCollection 2013.

PMID:
24066157
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Analysis of the HD-GYP domain cyclic dimeric GMP phosphodiesterase reveals a role in motility and the enzootic life cycle of Borrelia burgdorferi.

Sultan SZ, Pitzer JE, Boquoi T, Hobbs G, Miller MR, Motaleb MA.

Infect Immun. 2011 Aug;79(8):3273-83. doi: 10.1128/IAI.05153-11. Epub 2011 Jun 13.

PMID:
21670168
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover.

Ryan RP, Fouhy Y, Lucey JF, Crossman LC, Spiro S, He YW, Zhang LH, Heeb S, Cámara M, Williams P, Dow JM.

Proc Natl Acad Sci U S A. 2006 Apr 25;103(17):6712-7. Epub 2006 Apr 12.

PMID:
16611728
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis.

Guzzo CR, Dunger G, Salinas RK, Farah CS.

J Mol Biol. 2013 Jun 26;425(12):2174-97. doi: 10.1016/j.jmb.2013.03.021. Epub 2013 Mar 16.

PMID:
23507310
[PubMed - indexed for MEDLINE]
Free Article
10.

The functional role of a conserved loop in EAL domain-based cyclic di-GMP-specific phosphodiesterase.

Rao F, Qi Y, Chong HS, Kotaka M, Li B, Li J, Lescar J, Tang K, Liang ZX.

J Bacteriol. 2009 Aug;191(15):4722-31. doi: 10.1128/JB.00327-09. Epub 2009 Apr 17.

PMID:
19376848
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Enzymatically active and inactive phosphodiesterases and diguanylate cyclases are involved in regulation of Motility or sessility in Escherichia coli CFT073.

Spurbeck RR, Tarrien RJ, Mobley HL.

MBio. 2012 Oct 9;3(5). pii: e00307-12. doi: 10.1128/mBio.00307-12.

PMID:
23047748
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Crystal structures of YkuI and its complex with second messenger cyclic Di-GMP suggest catalytic mechanism of phosphodiester bond cleavage by EAL domains.

Minasov G, Padavattan S, Shuvalova L, Brunzelle JS, Miller DJ, Baslé A, Massa C, Collart FR, Schirmer T, Anderson WF.

J Biol Chem. 2009 May 8;284(19):13174-84. doi: 10.1074/jbc.M808221200. Epub 2009 Feb 24.

PMID:
19244251
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The HD-GYP domain, cyclic di-GMP signaling, and bacterial virulence to plants.

Dow JM, Fouhy Y, Lucey JF, Ryan RP.

Mol Plant Microbe Interact. 2006 Dec;19(12):1378-84. Review.

PMID:
17153922
[PubMed - indexed for MEDLINE]
Free Article
14.

Structural insight into the mechanism of c-di-GMP hydrolysis by EAL domain phosphodiesterases.

Tchigvintsev A, Xu X, Singer A, Chang C, Brown G, Proudfoot M, Cui H, Flick R, Anderson WF, Joachimiak A, Galperin MY, Savchenko A, Yakunin AF.

J Mol Biol. 2010 Sep 24;402(3):524-38. doi: 10.1016/j.jmb.2010.07.050. Epub 2010 Aug 4.

PMID:
20691189
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

HD-GYP domain proteins regulate biofilm formation and virulence in Pseudomonas aeruginosa.

Ryan RP, Lucey J, O'Donovan K, McCarthy Y, Yang L, Tolker-Nielsen T, Dow JM.

Environ Microbiol. 2009 May;11(5):1126-36. doi: 10.1111/j.1462-2920.2008.01842.x. Epub 2008 Dec 17.

PMID:
19170727
[PubMed - indexed for MEDLINE]
16.

Cyclic diguanylate turnover mediated by the sole GGDEF/EAL response regulator in Pseudomonas putida: its role in the rhizosphere and an analysis of its target processes.

Matilla MA, Travieso ML, Ramos JL, Ramos-González MI.

Environ Microbiol. 2011 Jul;13(7):1745-66. doi: 10.1111/j.1462-2920.2011.02499.x. Epub 2011 May 9.

PMID:
21554519
[PubMed - indexed for MEDLINE]
17.

c-di-GMP turn-over in Clostridium difficile is controlled by a plethora of diguanylate cyclases and phosphodiesterases.

Bordeleau E, Fortier LC, Malouin F, Burrus V.

PLoS Genet. 2011 Mar;7(3):e1002039. doi: 10.1371/journal.pgen.1002039. Epub 2011 Mar 31.

PMID:
21483756
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Genetic dissection of a motility-associated c-di-GMP signalling protein of Pseudomonas putida.

Österberg S, Åberg A, Herrera Seitz MK, Wolf-Watz M, Shingler V.

Environ Microbiol Rep. 2013 Aug;5(4):556-65. doi: 10.1111/1758-2229.12045. Epub 2013 Mar 22.

PMID:
23864570
[PubMed - indexed for MEDLINE]
19.

Sensing the messenger: the diverse ways that bacteria signal through c-di-GMP.

Krasteva PV, Giglio KM, Sondermann H.

Protein Sci. 2012 Jul;21(7):929-48. doi: 10.1002/pro.2093. Epub 2012 Jun 5. Review.

PMID:
22593024
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Structural basis for c-di-GMP-mediated inside-out signaling controlling periplasmic proteolysis.

Navarro MV, Newell PD, Krasteva PV, Chatterjee D, Madden DR, O'Toole GA, Sondermann H.

PLoS Biol. 2011 Feb 1;9(2):e1000588. doi: 10.1371/journal.pbio.1000588.

PMID:
21304926
[PubMed - indexed for MEDLINE]
Free PMC Article

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