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Items: 1 to 20 of 116

1.

CPLM: a database of protein lysine modifications.

Liu Z, Wang Y, Gao T, Pan Z, Cheng H, Yang Q, Cheng Z, Guo A, Ren J, Xue Y.

Nucleic Acids Res. 2014 Jan;42(Database issue):D531-6. doi: 10.1093/nar/gkt1093. Epub 2013 Nov 8.

2.

CPLA 1.0: an integrated database of protein lysine acetylation.

Liu Z, Cao J, Gao X, Zhou Y, Wen L, Yang X, Yao X, Ren J, Xue Y.

Nucleic Acids Res. 2011 Jan;39(Database issue):D1029-34. doi: 10.1093/nar/gkq939. Epub 2010 Nov 8.

3.

Cell signaling, post-translational protein modifications and NMR spectroscopy.

Theillet FX, Smet-Nocca C, Liokatis S, Thongwichian R, Kosten J, Yoon MK, Kriwacki RW, Landrieu I, Lippens G, Selenko P.

J Biomol NMR. 2012 Nov;54(3):217-36. doi: 10.1007/s10858-012-9674-x. Epub 2012 Sep 26.

PMID:
23011410
4.

The growing landscape of lysine acetylation links metabolism and cell signalling.

Choudhary C, Weinert BT, Nishida Y, Verdin E, Mann M.

Nat Rev Mol Cell Biol. 2014 Aug;15(8):536-50. doi: 10.1038/nrm3841. Review.

PMID:
25053359
5.

PLMLA: prediction of lysine methylation and lysine acetylation by combining multiple features.

Shi SP, Qiu JD, Sun XY, Suo SB, Huang SY, Liang RP.

Mol Biosyst. 2012 Apr;8(5):1520-7. doi: 10.1039/c2mb05502c. Epub 2012 Mar 8.

PMID:
22402705
6.

The functional diversity of protein lysine methylation.

Lanouette S, Mongeon V, Figeys D, Couture JF.

Mol Syst Biol. 2014 Apr 8;10:724. doi: 10.1002/msb.134974. Review.

7.

Lysine acetylation sites prediction using an ensemble of support vector machine classifiers.

Xu Y, Wang XB, Ding J, Wu LY, Deng NY.

J Theor Biol. 2010 May 7;264(1):130-5. doi: 10.1016/j.jtbi.2010.01.013. Epub 2010 Jan 18.

PMID:
20085770
8.

Protein lysine acylation and cysteine succination by intermediates of energy metabolism.

Lin H, Su X, He B.

ACS Chem Biol. 2012 Jun 15;7(6):947-60. doi: 10.1021/cb3001793. Epub 2012 May 16. Review.

9.

Lysine propionylation is a prevalent post-translational modification in Thermus thermophilus.

Okanishi H, Kim K, Masui R, Kuramitsu S.

Mol Cell Proteomics. 2014 Sep;13(9):2382-98. doi: 10.1074/mcp.M113.035659. Epub 2014 Jun 17.

10.

Predicting post-translational lysine acetylation using support vector machines.

Gnad F, Ren S, Choudhary C, Cox J, Mann M.

Bioinformatics. 2010 Jul 1;26(13):1666-8. doi: 10.1093/bioinformatics/btq260. Epub 2010 May 26.

11.

Lysine acetylation: codified crosstalk with other posttranslational modifications.

Yang XJ, Seto E.

Mol Cell. 2008 Aug 22;31(4):449-61. doi: 10.1016/j.molcel.2008.07.002. Review.

12.

Prediction of carbamylated lysine sites based on the one-class k-nearest neighbor method.

Huang G, Zhou Y, Zhang Y, Li BQ, Zhang N, Cai YD.

Mol Biosyst. 2013 Nov;9(11):2729-40. doi: 10.1039/c3mb70195f.

PMID:
24056952
13.

Site-specific mapping and time-resolved monitoring of lysine methylation by high-resolution NMR spectroscopy.

Theillet FX, Liokatis S, Jost JO, Bekei B, Rose HM, Binolfi A, Schwarzer D, Selenko P.

J Am Chem Soc. 2012 May 9;134(18):7616-9. doi: 10.1021/ja301895f. Epub 2012 Apr 27.

PMID:
22519908
14.

LAceP: lysine acetylation site prediction using logistic regression classifiers.

Hou T, Zheng G, Zhang P, Jia J, Li J, Xie L, Wei C, Li Y.

PLoS One. 2014 Feb 20;9(2):e89575. doi: 10.1371/journal.pone.0089575. eCollection 2014.

15.

Molecular characterization of propionyllysines in non-histone proteins.

Cheng Z, Tang Y, Chen Y, Kim S, Liu H, Li SS, Gu W, Zhao Y.

Mol Cell Proteomics. 2009 Jan;8(1):45-52. doi: 10.1074/mcp.M800224-MCP200. Epub 2008 Aug 26.

16.

Position-specific analysis and prediction for protein lysine acetylation based on multiple features.

Suo SB, Qiu JD, Shi SP, Sun XY, Huang SY, Chen X, Liang RP.

PLoS One. 2012;7(11):e49108. doi: 10.1371/journal.pone.0049108. Epub 2012 Nov 16.

17.

A method to distinguish between lysine acetylation and lysine methylation from protein sequences.

Shi SP, Qiu JD, Sun XY, Suo SB, Huang SY, Liang RP.

J Theor Biol. 2012 Oct 7;310:223-30. doi: 10.1016/j.jtbi.2012.06.030. Epub 2012 Jul 11.

PMID:
22796329
18.

Post-translational modifications of lysine in DNA-damage repair.

Chatterjee S, Senapati P, Kundu TK.

Essays Biochem. 2012;52:93-111. doi: 10.1042/bse0520093. Review.

PMID:
22708566
19.

Phogly-PseAAC: Prediction of lysine phosphoglycerylation in proteins incorporating with position-specific propensity.

Xu Y, Ding YX, Ding J, Wu LY, Deng NY.

J Theor Biol. 2015 Aug 21;379:10-5. doi: 10.1016/j.jtbi.2015.04.016. Epub 2015 Apr 24.

PMID:
25913879
20.

The first identification of lysine malonylation substrates and its regulatory enzyme.

Peng C, Lu Z, Xie Z, Cheng Z, Chen Y, Tan M, Luo H, Zhang Y, He W, Yang K, Zwaans BM, Tishkoff D, Ho L, Lombard D, He TC, Dai J, Verdin E, Ye Y, Zhao Y.

Mol Cell Proteomics. 2011 Dec;10(12):M111.012658. doi: 10.1074/mcp.M111.012658. Epub 2011 Sep 9.

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