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Results: 1 to 20 of 99

1.

Reverse-engineering post-transcriptional regulation of gap genes in Drosophila melanogaster.

Becker K, Balsa-Canto E, Cicin-Sain D, Hoermann A, Janssens H, Banga JR, Jaeger J.

PLoS Comput Biol. 2013 Oct;9(10):e1003281. doi: 10.1371/journal.pcbi.1003281. Epub 2013 Oct 31.

PMID:
24204230
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Efficient reverse-engineering of a developmental gene regulatory network.

Crombach A, Wotton KR, Cicin-Sain D, Ashyraliyev M, Jaeger J.

PLoS Comput Biol. 2012;8(7):e1002589. doi: 10.1371/journal.pcbi.1002589. Epub 2012 Jul 12.

PMID:
22807664
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Reverse engineering the gap gene network of Drosophila melanogaster.

Perkins TJ, Jaeger J, Reinitz J, Glass L.

PLoS Comput Biol. 2006 May;2(5):e51. Epub 2006 May 19.

PMID:
16710449
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Gene length may contribute to graded transcriptional responses in the Drosophila embryo.

McHale P, Mizutani CM, Kosman D, MacKay DL, Belu M, Hermann A, McGinnis W, Bier E, Hwa T.

Dev Biol. 2011 Dec 1;360(1):230-40. doi: 10.1016/j.ydbio.2011.08.016. Epub 2011 Sep 3.

PMID:
21920356
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

A Drosophila MBD family member is a transcriptional corepressor associated with specific genes.

Ballestar E, Pile LA, Wassarman DA, Wolffe AP, Wade PA.

Eur J Biochem. 2001 Oct;268(20):5397-406.

PMID:
11606202
[PubMed - indexed for MEDLINE]
Free Article
6.

Canalization of gene expression in the Drosophila blastoderm by gap gene cross regulation.

Manu, Surkova S, Spirov AV, Gursky VV, Janssens H, Kim AR, Radulescu O, Vanario-Alonso CE, Sharp DH, Samsonova M, Reinitz J.

PLoS Biol. 2009 Mar;7(3):e1000049. doi: 10.1371/journal.pbio.1000049. Epub 2009 Mar 10.

PMID:
19750121
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

A self-organizing system of repressor gradients establishes segmental complexity in Drosophila.

Clyde DE, Corado MS, Wu X, Paré A, Papatsenko D, Small S.

Nature. 2003 Dec 18;426(6968):849-53.

PMID:
14685241
[PubMed - indexed for MEDLINE]
8.

Gene expression noise in spatial patterning: hunchback promoter structure affects noise amplitude and distribution in Drosophila segmentation.

Holloway DM, Lopes FJ, da Fontoura Costa L, Travençolo BA, Golyandina N, Usevich K, Spirov AV.

PLoS Comput Biol. 2011 Feb 3;7(2):e1001069. doi: 10.1371/journal.pcbi.1001069.

PMID:
21304932
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Deciphering a transcriptional regulatory code: modeling short-range repression in the Drosophila embryo.

Fakhouri WD, Ay A, Sayal R, Dresch J, Dayringer E, Arnosti DN.

Mol Syst Biol. 2010;6:341. doi: 10.1038/msb.2009.97. Epub 2010 Jan 19.

PMID:
20087339
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Gene circuit analysis of the terminal gap gene huckebein.

Ashyraliyev M, Siggens K, Janssens H, Blom J, Akam M, Jaeger J.

PLoS Comput Biol. 2009 Oct;5(10):e1000548. doi: 10.1371/journal.pcbi.1000548. Epub 2009 Oct 30.

PMID:
19876378
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Drosophila brakeless interacts with atrophin and is required for tailless-mediated transcriptional repression in early embryos.

Haecker A, Qi D, Lilja T, Moussian B, Andrioli LP, Luschnig S, Mannervik M.

PLoS Biol. 2007 Jun;5(6):e145.

PMID:
17503969
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Comparative gene expression analysis of Dtg, a novel target gene of Dpp signaling pathway in the early Drosophila melanogaster embryo.

Hodar C, Zuñiga A, Pulgar R, Travisany D, Chacon C, Pino M, Maass A, Cambiazo V.

Gene. 2014 Feb 10;535(2):210-7. doi: 10.1016/j.gene.2013.11.032. Epub 2013 Dec 7.

PMID:
24321690
[PubMed - indexed for MEDLINE]
13.

Trachealess (Trh) regulates all tracheal genes during Drosophila embryogenesis.

Chung S, Chavez C, Andrew DJ.

Dev Biol. 2011 Dec 1;360(1):160-72. doi: 10.1016/j.ydbio.2011.09.014. Epub 2011 Sep 22.

PMID:
21963537
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

A software tool to model genetic regulatory networks. Applications to the modeling of threshold phenomena and of spatial patterning in Drosophila.

Dilão R, Muraro D.

PLoS One. 2010 May 27;5(5):e10743. doi: 10.1371/journal.pone.0010743.

PMID:
20523731
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Sterile alpha motif domain-mediated self-association plays an essential role in modulating the activity of the Drosophila ETS family transcriptional repressor Yan.

Zhang J, Graham TG, Vivekanand P, Cote L, Cetera M, Rebay I.

Mol Cell Biol. 2010 Mar;30(5):1158-70. doi: 10.1128/MCB.01225-09. Epub 2010 Jan 4.

PMID:
20048052
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Molecular analysis of the notch repressor-complex in Drosophila: characterization of potential hairless binding sites on suppressor of hairless.

Kurth P, Preiss A, Kovall RA, Maier D.

PLoS One. 2011;6(11):e27986. doi: 10.1371/journal.pone.0027986. Epub 2011 Nov 18.

PMID:
22125648
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Identification of Ind transcription activation and repression domains required for dorsoventral patterning of the CNS.

Von Ohlen TL, Moses C.

Mech Dev. 2009 Jul;126(7):552-62. doi: 10.1016/j.mod.2009.03.008. Epub 2009 Apr 5.

PMID:
19348939
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Quantitative and predictive model of transcriptional control of the Drosophila melanogaster even skipped gene.

Janssens H, Hou S, Jaeger J, Kim AR, Myasnikova E, Sharp D, Reinitz J.

Nat Genet. 2006 Oct;38(10):1159-65. Epub 2006 Sep 17.

PMID:
16980977
[PubMed - indexed for MEDLINE]
19.

Progressive tarsal patterning in the Drosophila by temporally dynamic regulation of transcription factor genes.

Natori K, Tajiri R, Furukawa S, Kojima T.

Dev Biol. 2012 Jan 15;361(2):450-62. doi: 10.1016/j.ydbio.2011.10.031. Epub 2011 Oct 31.

PMID:
22079694
[PubMed - indexed for MEDLINE]
Free Article
20.

Single-minded, Dmef2, Pointed, and Su(H) act on identified regulatory sequences of the roughest gene in Drosophila melanogaster.

Apitz H, Strünkelnberg M, de Couet HG, Fischbach KF.

Dev Genes Evol. 2005 Sep;215(9):460-69. Epub 2005 Aug 11.

PMID:
16096801
[PubMed - indexed for MEDLINE]

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