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Results: 1 to 20 of 116

Similar articles for PubMed (Select 24057379)

1.

Highly reproducible ChIP-on-chip analysis to identify genome-wide protein binding and chromatin status in Arabidopsis thaliana.

Kim JM, To TK, Tanaka M, Endo TA, Matsui A, Ishida J, Robertson FC, Toyoda T, Seki M.

Methods Mol Biol. 2014;1062:405-26. doi: 10.1007/978-1-62703-580-4_22.

PMID:
24057379
2.

Chromatin immunoprecipitation protocol for histone modifications and protein-DNA binding analyses in Arabidopsis.

Pien S, Grossniklaus U.

Methods Mol Biol. 2010;631:209-20. doi: 10.1007/978-1-60761-646-7_15.

PMID:
20204877
3.

Chromatin immunoprecipitation (ChIP) of plant transcription factors followed by sequencing (ChIP-SEQ) or hybridization to whole genome arrays (ChIP-CHIP).

Kaufmann K, Muiño JM, Østerås M, Farinelli L, Krajewski P, Angenent GC.

Nat Protoc. 2010 Mar;5(3):457-72. doi: 10.1038/nprot.2009.244. Epub 2010 Feb 18.

PMID:
20203663
4.

An efficient chromatin immunoprecipitation (ChIP) protocol for studying histone modifications in Arabidopsis plants.

Saleh A, Alvarez-Venegas R, Avramova Z.

Nat Protoc. 2008;3(6):1018-25. doi: 10.1038/nprot.2008.66.

PMID:
18536649
5.
6.

Quantitatively profiling genome-wide patterns of histone modifications in Arabidopsis thaliana using ChIP-seq.

Luo C, Lam E.

Methods Mol Biol. 2014;1112:177-93. doi: 10.1007/978-1-62703-773-0_12.

PMID:
24478015
7.

Genome-wide mapping of Arabidopsis thaliana origins of DNA replication and their associated epigenetic marks.

Costas C, de la Paz Sanchez M, Stroud H, Yu Y, Oliveros JC, Feng S, Benguria A, López-Vidriero I, Zhang X, Solano R, Jacobsen SE, Gutierrez C.

Nat Struct Mol Biol. 2011 Mar;18(3):395-400. doi: 10.1038/nsmb.1988. Epub 2011 Feb 6.

8.

Chromatin immunoprecipitation experiments to investigate in vivo binding of Arabidopsis transcription factors to target sequences.

Fode B, Gatz C.

Methods Mol Biol. 2009;479:261-72. doi: 10.1007/978-1-59745-289-2_17.

PMID:
19083182
9.

Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.

Benhamed M, Martin-Magniette ML, Taconnat L, Bitton F, Servet C, De Clercq R, De Meyer B, Buysschaert C, Rombauts S, Villarroel R, Aubourg S, Beynon J, Bhalerao RP, Coupland G, Gruissem W, Menke FL, Weisshaar B, Renou JP, Zhou DX, Hilson P.

Plant J. 2008 Nov;56(3):493-504. doi: 10.1111/j.1365-313X.2008.03606.x. Epub 2008 Sep 18.

PMID:
18644002
10.

Direct interaction of AGL24 and SOC1 integrates flowering signals in Arabidopsis.

Liu C, Chen H, Er HL, Soo HM, Kumar PP, Han JH, Liou YC, Yu H.

Development. 2008 Apr;135(8):1481-91. doi: 10.1242/dev.020255. Epub 2008 Mar 13.

11.

The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin in Arabidopsis.

Yun J, Kim YS, Jung JH, Seo PJ, Park CM.

J Biol Chem. 2012 May 4;287(19):15307-16. doi: 10.1074/jbc.M111.318477. Epub 2012 Mar 22.

12.

Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis.

Tao Z, Shen L, Liu C, Liu L, Yan Y, Yu H.

Plant J. 2012 May;70(4):549-61. doi: 10.1111/j.1365-313X.2012.04919.x. Epub 2012 Mar 5.

PMID:
22268548
13.
14.

Mapping and characterization of DNase I hypersensitive sites in Arabidopsis chromatin.

Kodama Y, Nagaya S, Shinmyo A, Kato K.

Plant Cell Physiol. 2007 Mar;48(3):459-70. Epub 2007 Feb 5.

PMID:
17283013
16.

Toward the identification and regulation of the Arabidopsis thaliana ABI3 regulon.

Mönke G, Seifert M, Keilwagen J, Mohr M, Grosse I, Hähnel U, Junker A, Weisshaar B, Conrad U, Bäumlein H, Altschmied L.

Nucleic Acids Res. 2012 Sep 1;40(17):8240-54. Epub 2012 Jun 22.

17.

Chromatin immunoprecipitation to verify or to identify in vivo protein-DNA interactions.

Zheng Y, Perry SE.

Methods Mol Biol. 2011;754:277-91. doi: 10.1007/978-1-61779-154-3_16.

PMID:
21720959
18.

An arabidopsis promoter microarray and its initial usage in the identification of HY5 binding targets in vitro.

Gao Y, Li J, Strickland E, Hua S, Zhao H, Chen Z, Qu L, Deng XW.

Plant Mol Biol. 2004 Mar;54(5):683-99.

PMID:
15356388
19.
20.

Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana.

Kim JM, To TK, Ishida J, Morosawa T, Kawashima M, Matsui A, Toyoda T, Kimura H, Shinozaki K, Seki M.

Plant Cell Physiol. 2008 Oct;49(10):1580-8. doi: 10.1093/pcp/pcn133. Epub 2008 Sep 8. Erratum in: Plant Cell Physiol. 2009 Oct;50(10):1856.

PMID:
18779215
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