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Results: 1 to 20 of 165

1.

Positional effects of AAN motifs in rpoS regulation by sRNAs and Hfq.

Peng Y, Soper TJ, Woodson SA.

J Mol Biol. 2014 Jan 23;426(2):275-85. doi: 10.1016/j.jmb.2013.08.026. Epub 2013 Sep 16.

PMID:
24051417
[PubMed - indexed for MEDLINE]
2.

The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA.

Soper TJ, Woodson SA.

RNA. 2008 Sep;14(9):1907-17. doi: 10.1261/rna.1110608. Epub 2008 Jul 24.

PMID:
18658123
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Positive regulation by small RNAs and the role of Hfq.

Soper T, Mandin P, Majdalani N, Gottesman S, Woodson SA.

Proc Natl Acad Sci U S A. 2010 May 25;107(21):9602-7. doi: 10.1073/pnas.1004435107. Epub 2010 May 10.

PMID:
20457943
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The influence of Escherichia coli Hfq mutations on RNA binding and sRNA•mRNA duplex formation in rpoS riboregulation.

Updegrove TB, Wartell RM.

Biochim Biophys Acta. 2011 Oct;1809(10):532-40. doi: 10.1016/j.bbagrm.2011.08.006. Epub 2011 Aug 22.

PMID:
21889623
[PubMed - indexed for MEDLINE]
Free Article
5.

Effect of Hfq on RprA-rpoS mRNA pairing: Hfq-RNA binding and the influence of the 5' rpoS mRNA leader region.

Updegrove T, Wilf N, Sun X, Wartell RM.

Biochemistry. 2008 Oct 28;47(43):11184-95. doi: 10.1021/bi800479p. Epub 2008 Oct 1.

PMID:
18826256
[PubMed - indexed for MEDLINE]
6.

Hfq binding changes the structure of Escherichia coli small noncoding RNAs OxyS and RprA, which are involved in the riboregulation of rpoS.

Henderson CA, Vincent HA, Casamento A, Stone CM, Phillips JO, Cary PD, Sobott F, Gowers DM, Taylor JE, Callaghan AJ.

RNA. 2013 Aug;19(8):1089-104. doi: 10.1261/rna.034595.112. Epub 2013 Jun 26.

PMID:
23804244
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Conserved arginines on the rim of Hfq catalyze base pair formation and exchange.

Panja S, Schu DJ, Woodson SA.

Nucleic Acids Res. 2013 Aug;41(15):7536-46. doi: 10.1093/nar/gkt521. Epub 2013 Jun 14.

PMID:
23771143
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Post-transcriptional regulator Hfq binds catalase HPII: crystal structure of the complex.

Yonekura K, Watanabe M, Kageyama Y, Hirata K, Yamamoto M, Maki-Yonekura S.

PLoS One. 2013 Nov 6;8(11):e78216. doi: 10.1371/journal.pone.0078216. eCollection 2013.

PMID:
24223139
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Hfq proximity and orientation controls RNA annealing.

Panja S, Woodson SA.

Nucleic Acids Res. 2012 Sep 1;40(17):8690-7. Epub 2012 Jul 2.

PMID:
22761405
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Translational activation of rpoS mRNA by the non-coding RNA DsrA and Hfq does not require ribosome binding.

Vecerek B, Beich-Frandsen M, Resch A, Bläsi U.

Nucleic Acids Res. 2010 Mar;38(4):1284-93. doi: 10.1093/nar/gkp1125. Epub 2009 Dec 6.

PMID:
19969548
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Cycling of the Sm-like protein Hfq on the DsrA small regulatory RNA.

Lease RA, Woodson SA.

J Mol Biol. 2004 Dec 10;344(5):1211-23.

PMID:
15561140
[PubMed - indexed for MEDLINE]
12.

Major role for mRNA binding and restructuring in sRNA recruitment by Hfq.

Soper TJ, Doxzen K, Woodson SA.

RNA. 2011 Aug;17(8):1544-50. doi: 10.1261/rna.2767211. Epub 2011 Jun 24.

PMID:
21705431
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Requirement of upstream Hfq-binding (ARN)x elements in glmS and the Hfq C-terminal region for GlmS upregulation by sRNAs GlmZ and GlmY.

Salim NN, Faner MA, Philip JA, Feig AL.

Nucleic Acids Res. 2012 Sep;40(16):8021-32. doi: 10.1093/nar/gks392. Epub 2012 May 31.

PMID:
22661574
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Competition among Hfq-binding small RNAs in Escherichia coli.

Moon K, Gottesman S.

Mol Microbiol. 2011 Dec;82(6):1545-62. doi: 10.1111/j.1365-2958.2011.07907.x. Epub 2011 Nov 20.

PMID:
22040174
[PubMed - indexed for MEDLINE]
15.

Hfq-bridged ternary complex is important for translation activation of rpoS by DsrA.

Wang W, Wang L, Wu J, Gong Q, Shi Y.

Nucleic Acids Res. 2013 Jun;41(11):5938-48. doi: 10.1093/nar/gkt276. Epub 2013 Apr 19.

PMID:
23605038
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA.

Arluison V, Hohng S, Roy R, Pellegrini O, Régnier P, Ha T.

Nucleic Acids Res. 2007;35(3):999-1006. Epub 2007 Jan 26.

PMID:
17259214
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Structure and RNA-binding properties of the bacterial LSm protein Hfq.

Sauer E.

RNA Biol. 2013 Apr;10(4):610-8. doi: 10.4161/rna.24201. Epub 2013 Mar 27. Review.

PMID:
23535768
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Modification of the RpoS network with a synthetic small RNA.

Jin Y, Wu J, Li Y, Cai Z, Huang JD.

Nucleic Acids Res. 2013 Sep;41(17):8332-40. doi: 10.1093/nar/gkt604. Epub 2013 Jul 9.

PMID:
23842672
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Requirement of the CsdA DEAD-box helicase for low temperature riboregulation of rpoS mRNA.

Resch A, Većerek B, Palavra K, Bläsi U.

RNA Biol. 2010 Nov-Dec;7(6):796-802. Epub 2010 Nov 1.

PMID:
21045550
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

An upstream Hfq binding site in the fhlA mRNA leader region facilitates the OxyS-fhlA interaction.

Salim NN, Feig AL.

PLoS One. 2010 Sep 28;5(9). pii: e13028. doi: 10.1371/journal.pone.0013028.

PMID:
20927406
[PubMed - indexed for MEDLINE]
Free PMC Article

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