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Results: 1 to 20 of 134

1.

Transcript assembly and quantification by RNA-Seq reveals differentially expressed genes between soft-endocarp and hard-endocarp hawthorns.

Dai H, Han G, Yan Y, Zhang F, Liu Z, Li X, Li W, Ma Y, Li H, Liu Y, Zhang Z.

PLoS One. 2013 Sep 5;8(9):e72910. doi: 10.1371/journal.pone.0072910. eCollection 2013.

PMID:
24039819
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Stone formation in peach fruit exhibits spatial coordination of the lignin and flavonoid pathways and similarity to Arabidopsis dehiscence.

Dardick CD, Callahan AM, Chiozzotto R, Schaffer RJ, Piagnani MC, Scorza R.

BMC Biol. 2010 Feb 9;8:13. doi: 10.1186/1741-7007-8-13.

PMID:
20144217
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles.

Guo S, Liu J, Zheng Y, Huang M, Zhang H, Gong G, He H, Ren Y, Zhong S, Fei Z, Xu Y.

BMC Genomics. 2011 Sep 21;12:454. doi: 10.1186/1471-2164-12-454.

PMID:
21936920
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Comparative transcriptional profiling analysis of olive ripe-fruit pericarp and abscission zone tissues shows expression differences and distinct patterns of transcriptional regulation.

Parra R, Paredes MA, Sanchez-Calle IM, Gomez-Jimenez MC.

BMC Genomics. 2013 Dec 9;14:866. doi: 10.1186/1471-2164-14-866.

PMID:
24320622
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Transcriptome profiling of fruit development and maturation in Chinese white pear (Pyrus bretschneideri Rehd).

Xie M, Huang Y, Zhang Y, Wang X, Yang H, Yu O, Dai W, Fang C.

BMC Genomics. 2013 Nov 23;14:823. doi: 10.1186/1471-2164-14-823.

PMID:
24267665
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Berry skin development in Norton grape: distinct patterns of transcriptional regulation and flavonoid biosynthesis.

Ali MB, Howard S, Chen S, Wang Y, Yu O, Kovacs LG, Qiu W.

BMC Plant Biol. 2011 Jan 10;11:7. doi: 10.1186/1471-2229-11-7.

PMID:
21219654
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

De Novo transcriptome sequencing reveals important molecular networks and metabolic pathways of the plant, Chlorophytum borivilianum.

Kalra S, Puniya BL, Kulshreshtha D, Kumar S, Kaur J, Ramachandran S, Singh K.

PLoS One. 2013 Dec 23;8(12):e83336. doi: 10.1371/journal.pone.0083336. eCollection 2013.

PMID:
24376689
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

De novo assembly and characterization of fruit transcriptome in Litchi chinensis Sonn and analysis of differentially regulated genes in fruit in response to shading.

Li C, Wang Y, Huang X, Li J, Wang H, Li J.

BMC Genomics. 2013 Aug 14;14:552. doi: 10.1186/1471-2164-14-552.

PMID:
23941440
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Comparative transcripts profiling of fruit mesocarp and endocarp relevant to secondary metabolism by suppression subtractive hybridization in Azadirachta indica (neem).

Narnoliya LK, Rajakani R, Sangwan NS, Gupta V, Sangwan RS.

Mol Biol Rep. 2014 May;41(5):3147-62. doi: 10.1007/s11033-014-3174-x. Epub 2014 Jan 30.

PMID:
24477588
[PubMed - indexed for MEDLINE]
10.

Identification of lignin genes and regulatory sequences involved in secondary cell wall formation in Acacia auriculiformis and Acacia mangium via de novo transcriptome sequencing.

Wong MM, Cannon CH, Wickneswari R.

BMC Genomics. 2011 Jul 5;12:342. doi: 10.1186/1471-2164-12-342.

PMID:
21729267
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds.

Shi CY, Yang H, Wei CL, Yu O, Zhang ZZ, Jiang CJ, Sun J, Li YY, Chen Q, Xia T, Wan XC.

BMC Genomics. 2011 Feb 28;12:131. doi: 10.1186/1471-2164-12-131.

PMID:
21356090
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.).

Li D, Deng Z, Qin B, Liu X, Men Z.

BMC Genomics. 2012 May 18;13:192. doi: 10.1186/1471-2164-13-192.

PMID:
22607098
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Generation and analysis of ESTs from strawberry (Fragaria xananassa) fruits and evaluation of their utility in genetic and molecular studies.

Bombarely A, Merchante C, Csukasi F, Cruz-Rus E, Caballero JL, Medina-Escobar N, Blanco-Portales R, Botella MA, Muñoz-Blanco J, Sánchez-Sevilla JF, Valpuesta V.

BMC Genomics. 2010 Sep 17;11:503. doi: 10.1186/1471-2164-11-503.

PMID:
20849591
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genome-scale transcriptome analysis of the desert poplar, Populus euphratica.

Qiu Q, Ma T, Hu Q, Liu B, Wu Y, Zhou H, Wang Q, Wang J, Liu J.

Tree Physiol. 2011 Apr;31(4):452-61. doi: 10.1093/treephys/tpr015. Epub 2011 Mar 22.

PMID:
21427158
[PubMed - indexed for MEDLINE]
15.

De novo characterization of the Anthurium transcriptome and analysis of its digital gene expression under cold stress.

Tian DQ, Pan XY, Yu YM, Wang WY, Zhang F, Ge YY, Shen XL, Shen FQ, Liu XJ.

BMC Genomics. 2013 Nov 25;14:827. doi: 10.1186/1471-2164-14-827.

PMID:
24267953
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Analysis of the Dendrobium officinale transcriptome reveals putative alkaloid biosynthetic genes and genetic markers.

Guo X, Li Y, Li C, Luo H, Wang L, Qian J, Luo X, Xiang L, Song J, Sun C, Xu H, Yao H, Chen S.

Gene. 2013 Sep 15;527(1):131-8. doi: 10.1016/j.gene.2013.05.073. Epub 2013 Jun 10.

PMID:
23756193
[PubMed - indexed for MEDLINE]
17.

An efficient approach to finding Siraitia grosvenorii triterpene biosynthetic genes by RNA-seq and digital gene expression analysis.

Tang Q, Ma X, Mo C, Wilson IW, Song C, Zhao H, Yang Y, Fu W, Qiu D.

BMC Genomics. 2011 Jul 5;12:343. doi: 10.1186/1471-2164-12-343.

PMID:
21729270
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The first Illumina-based de novo transcriptome sequencing and analysis of safflower flowers.

Lulin H, Xiao Y, Pei S, Wen T, Shangqin H.

PLoS One. 2012;7(6):e38653. doi: 10.1371/journal.pone.0038653. Epub 2012 Jun 19.

PMID:
22723874
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

De novo characterization of the Chinese fir (Cunninghamia lanceolata) transcriptome and analysis of candidate genes involved in cellulose and lignin biosynthesis.

Huang HH, Xu LL, Tong ZK, Lin EP, Liu QP, Cheng LJ, Zhu MY.

BMC Genomics. 2012 Nov 21;13:648. doi: 10.1186/1471-2164-13-648.

PMID:
23171398
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Pyrosequencing of the Camptotheca acuminata transcriptome reveals putative genes involved in camptothecin biosynthesis and transport.

Sun Y, Luo H, Li Y, Sun C, Song J, Niu Y, Zhu Y, Dong L, Lv A, Tramontano E, Chen S.

BMC Genomics. 2011 Oct 30;12:533. doi: 10.1186/1471-2164-12-533.

PMID:
22035094
[PubMed - indexed for MEDLINE]
Free PMC Article

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