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Items: 1 to 20 of 106

2.

A six-dimensional alpha proton detection-based APSY experiment for backbone assignment of intrinsically disordered proteins.

Yao X, Becker S, Zweckstetter M.

J Biomol NMR. 2014 Dec;60(4):231-40. doi: 10.1007/s10858-014-9872-9. Epub 2014 Nov 4.

PMID:
25367087
3.

Longitudinal relaxation properties of (1)H(N) and (1)H(α) determined by direct-detected (13)C NMR experiments to study intrinsically disordered proteins (IDPs).

Hošek T, Gil-Caballero S, Pierattelli R, Brutscher B, Felli IC.

J Magn Reson. 2015 May;254:19-26. doi: 10.1016/j.jmr.2015.01.017. Epub 2015 Feb 12.

PMID:
25771525
4.

Kirkwood-Buff Approach Rescues Overcollapse of a Disordered Protein in Canonical Protein Force Fields.

Mercadante D, Milles S, Fuertes G, Svergun DI, Lemke EA, Gräter F.

J Phys Chem B. 2015 Jun 25;119(25):7975-84. doi: 10.1021/acs.jpcb.5b03440. Epub 2015 Jun 15.

PMID:
26030189
5.

Molecular dynamics study of the solvation of an alpha-helical transmembrane peptide by DMSO.

Duarte AM, van Mierlo CP, Hemminga MA.

J Phys Chem B. 2008 Jul 24;112(29):8664-71. doi: 10.1021/jp076678j. Epub 2008 Jun 27.

PMID:
18582096
6.
7.

CP-HISQC: a better version of HSQC experiment for intrinsically disordered proteins under physiological conditions.

Yuwen T, Skrynnikov NR.

J Biomol NMR. 2014 Mar;58(3):175-92. doi: 10.1007/s10858-014-9815-5. Epub 2014 Feb 5.

PMID:
24496557
8.

Conformational propensities of intrinsically disordered proteins from NMR chemical shifts.

Kragelj J, Ozenne V, Blackledge M, Jensen MR.

Chemphyschem. 2013 Sep 16;14(13):3034-45. doi: 10.1002/cphc.201300387. Epub 2013 Jun 21. Review.

PMID:
23794453
9.

Multiple recognition motifs in nucleoporin Nup159 provide a stable and rigid Nup159-Dyn2 assembly.

Nyarko A, Song Y, Nováček J, Žídek L, Barbar E.

J Biol Chem. 2013 Jan 25;288(4):2614-22. doi: 10.1074/jbc.M112.432831. Epub 2012 Dec 8.

10.

Diproline templates as folding nuclei in designed peptides. Conformational analysis of synthetic peptide helices containing amino terminal Pro-Pro segments.

Rai R, Aravinda S, Kanagarajadurai K, Raghothama S, Shamala N, Balaram P.

J Am Chem Soc. 2006 Jun 21;128(24):7916-28.

PMID:
16771506
11.

Conformational properties of the Arg-Leu-Gly tripeptide--DMSO--water clusters with the combined use of molecular dynamics and energy minimization studies.

Demetropoulos I, Tsibiris A, Tsikaris V, Sakarellos-Daitsiotis M, Sakarellos C.

J Biomol Struct Dyn. 1995 Feb;12(4):755-65.

PMID:
7779298
12.

High-dimensionality 13C direct-detected NMR experiments for the automatic assignment of intrinsically disordered proteins.

Bermel W, Felli IC, Gonnelli L, Koźmiński W, Piai A, Pierattelli R, Zawadzka-Kazimierczuk A.

J Biomol NMR. 2013 Dec;57(4):353-61. doi: 10.1007/s10858-013-9793-z. Epub 2013 Nov 8.

PMID:
24203099
13.

Intramolecular cohesion of coils mediated by phenylalanine--glycine motifs in the natively unfolded domain of a nucleoporin.

Krishnan VV, Lau EY, Yamada J, Denning DP, Patel SS, Colvin ME, Rexach MF.

PLoS Comput Biol. 2008 Aug 8;4(8):e1000145. doi: 10.1371/journal.pcbi.1000145.

14.

1H NMR spectra part 31: 1H chemical shifts of amides in DMSO solvent.

Abraham RJ, Griffiths L, Perez M.

Magn Reson Chem. 2014 Jul;52(7):395-408. doi: 10.1002/mrc.4079. Epub 2014 May 14.

PMID:
24824670
15.

A bimodal distribution of two distinct categories of intrinsically disordered structures with separate functions in FG nucleoporins.

Yamada J, Phillips JL, Patel S, Goldfien G, Calestagne-Morelli A, Huang H, Reza R, Acheson J, Krishnan VV, Newsam S, Gopinathan A, Lau EY, Colvin ME, Uversky VN, Rexach MF.

Mol Cell Proteomics. 2010 Oct;9(10):2205-24. doi: 10.1074/mcp.M000035-MCP201. Epub 2010 Apr 5.

16.

pH-Independence of trialanine and the effects of termini blocking in short peptides: a combined vibrational, NMR, UVCD, and molecular dynamics study.

Toal S, Meral D, Verbaro D, Urbanc B, Schweitzer-Stenner R.

J Phys Chem B. 2013 Apr 11;117(14):3689-706. doi: 10.1021/jp310466b. Epub 2013 Mar 28.

17.

The Ac-RGD-NH2 peptide as a probe of slow conformational exchange of short linear peptides in DMSO.

Biris N, Stavrakoudis A, Politou AS, Mikros E, Sakarellos-Daitsiotis M, Sakarellos C, Tsikaris V.

Biopolymers. 2003 May;69(1):72-86.

PMID:
12717723
18.

New 13C-detected experiments for the assignment of intrinsically disordered proteins.

Pantoja-Uceda D, Santoro J.

J Biomol NMR. 2014 May;59(1):43-50. doi: 10.1007/s10858-014-9827-1. Epub 2014 Apr 4.

PMID:
24699834
19.

Structural requirements for the ubiquitin-associated domain of the mRNA export factor Mex67 to bind its specific targets, the transcription elongation THO complex component Hpr1 and nucleoporin FXFG repeats.

Hobeika M, Brockmann C, Gruessing F, Neuhaus D, Divita G, Stewart M, Dargemont C.

J Biol Chem. 2009 Jun 26;284(26):17575-83. doi: 10.1074/jbc.M109.004374. Epub 2009 Apr 28.

20.

Hydrogen exchange of disordered proteins in Escherichia coli.

Smith AE, Zhou LZ, Pielak GJ.

Protein Sci. 2015 May;24(5):706-13. doi: 10.1002/pro.2643. Epub 2015 Mar 2.

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