Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 94

1.

Distinct polyadenylation landscapes of diverse human tissues revealed by a modified PA-seq strategy.

Ni T, Yang Y, Hafez D, Yang W, Kiesewetter K, Wakabayashi Y, Ohler U, Peng W, Zhu J.

BMC Genomics. 2013 Sep 11;14:615. doi: 10.1186/1471-2164-14-615.

PMID:
24025092
[PubMed - in process]
Free PMC Article
2.

Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq.

Shepard PJ, Choi EA, Lu J, Flanagan LA, Hertel KJ, Shi Y.

RNA. 2011 Apr;17(4):761-72. doi: 10.1261/rna.2581711. Epub 2011 Feb 22.

PMID:
21343387
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression.

Lianoglou S, Garg V, Yang JL, Leslie CS, Mayr C.

Genes Dev. 2013 Nov 1;27(21):2380-96. doi: 10.1101/gad.229328.113. Epub 2013 Oct 21.

PMID:
24145798
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Dynamic expression of 3' UTRs revealed by Poisson hidden Markov modeling of RNA-Seq: implications in gene expression profiling.

Lu J, Bushel PR.

Gene. 2013 Sep 25;527(2):616-23. doi: 10.1016/j.gene.2013.06.052. Epub 2013 Jul 9.

PMID:
23845781
[PubMed - indexed for MEDLINE]
5.

A quantitative atlas of polyadenylation in five mammals.

Derti A, Garrett-Engele P, Macisaac KD, Stevens RC, Sriram S, Chen R, Rohl CA, Johnson JM, Babak T.

Genome Res. 2012 Jun;22(6):1173-83. doi: 10.1101/gr.132563.111. Epub 2012 Mar 27.

PMID:
22454233
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Alternative cleavage and polyadenylation during colorectal cancer development.

Morris AR, Bos A, Diosdado B, Rooijers K, Elkon R, Bolijn AS, Carvalho B, Meijer GA, Agami R.

Clin Cancer Res. 2012 Oct 1;18(19):5256-66. doi: 10.1158/1078-0432.CCR-12-0543. Epub 2012 Aug 8.

PMID:
22874640
[PubMed - indexed for MEDLINE]
Free Article
7.

Reprogramming of 3' untranslated regions of mRNAs by alternative polyadenylation in generation of pluripotent stem cells from different cell types.

Ji Z, Tian B.

PLoS One. 2009 Dec 23;4(12):e8419. doi: 10.1371/journal.pone.0008419.

PMID:
20037631
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Analysis of alternative cleavage and polyadenylation by 3' region extraction and deep sequencing.

Hoque M, Ji Z, Zheng D, Luo W, Li W, You B, Park JY, Yehia G, Tian B.

Nat Methods. 2013 Feb;10(2):133-9. doi: 10.1038/nmeth.2288. Epub 2012 Dec 16.

PMID:
23241633
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genome-wide identification and predictive modeling of tissue-specific alternative polyadenylation.

Hafez D, Ni T, Mukherjee S, Zhu J, Ohler U.

Bioinformatics. 2013 Jul 1;29(13):i108-16. doi: 10.1093/bioinformatics/btt233.

PMID:
23812974
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Differential genome-wide profiling of tandem 3' UTRs among human breast cancer and normal cells by high-throughput sequencing.

Fu Y, Sun Y, Li Y, Li J, Rao X, Chen C, Xu A.

Genome Res. 2011 May;21(5):741-7. doi: 10.1101/gr.115295.110. Epub 2011 Apr 7.

PMID:
21474764
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Transcriptome dynamics through alternative polyadenylation in developmental and environmental responses in plants revealed by deep sequencing.

Shen Y, Venu RC, Nobuta K, Wu X, Notibala V, Demirci C, Meyers BC, Wang GL, Ji G, Li QQ.

Genome Res. 2011 Sep;21(9):1478-86. doi: 10.1101/gr.114744.110. Epub 2011 Aug 3.

PMID:
21813626
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A global analysis of tandem 3'UTRs in eosinophilic chronic rhinosinusitis with nasal polyps.

Tian P, Sun Y, Li Y, Liu X, Wan L, Li J, Ma Y, Xu A, Fu Y, Zou H.

PLoS One. 2012;7(11):e48997. doi: 10.1371/journal.pone.0048997. Epub 2012 Nov 19.

PMID:
23185289
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Global patterns of tissue-specific alternative polyadenylation in Drosophila.

Smibert P, Miura P, Westholm JO, Shenker S, May G, Duff MO, Zhang D, Eads BD, Carlson J, Brown JB, Eisman RC, Andrews J, Kaufman T, Cherbas P, Celniker SE, Graveley BR, Lai EC.

Cell Rep. 2012 Mar 29;1(3):277-89. Erratum in: Cell Rep. 2013 Mar 28;3(3):969.

PMID:
22685694
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Widespread and extensive lengthening of 3' UTRs in the mammalian brain.

Miura P, Shenker S, Andreu-Agullo C, Westholm JO, Lai EC.

Genome Res. 2013 May;23(5):812-25. doi: 10.1101/gr.146886.112. Epub 2013 Mar 21.

PMID:
23520388
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Analysis of C. elegans intestinal gene expression and polyadenylation by fluorescence-activated nuclei sorting and 3'-end-seq.

Haenni S, Ji Z, Hoque M, Rust N, Sharpe H, Eberhard R, Browne C, Hengartner MO, Mellor J, Tian B, Furger A.

Nucleic Acids Res. 2012 Jul;40(13):6304-18. Epub 2012 Mar 29.

PMID:
22467213
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Alternative cleavage and polyadenylation: extent, regulation and function.

Elkon R, Ugalde AP, Agami R.

Nat Rev Genet. 2013 Jul;14(7):496-506. doi: 10.1038/nrg3482. Review.

PMID:
23774734
[PubMed - indexed for MEDLINE]
17.

Biased alternative polyadenylation in human tissues.

Zhang H, Lee JY, Tian B.

Genome Biol. 2005;6(12):R100. Epub 2005 Nov 28.

PMID:
16356263
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

APADB: a database for alternative polyadenylation and microRNA regulation events.

Müller S, Rycak L, Afonso-Grunz F, Winter P, Zawada AM, Damrath E, Scheider J, Schmäh J, Koch I, Kahl G, Rotter B.

Database (Oxford). 2014 Jul 22;2014. pii: bau076. doi: 10.1093/database/bau076. Print 2014.

PMID:
25052703
[PubMed - in process]
Free PMC Article
19.

Alternative polyadenylation: a mechanism maximizing transcriptome diversity in higher eukaryotes.

Xing D, Li QQ.

Plant Signal Behav. 2009 May;4(5):440-2. doi: 10.1104/pp.108.129817. Epub 2009 May 6.

PMID:
19816115
[PubMed]
Free PMC Article
20.

RNA-Binding Proteins in Regulation of Alternative Cleavage and Polyadenylation.

Zheng D, Tian B.

Adv Exp Med Biol. 2014;825:97-127. doi: 10.1007/978-1-4939-1221-6_3.

PMID:
25201104
[PubMed - in process]

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk