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Results: 1 to 20 of 108

1.

Z-DNA stabilization is dominated by the Hofmeister effect.

Bae S, Son H, Kim YG, Hohng S.

Phys Chem Chem Phys. 2013 Oct 14;15(38):15829-32. doi: 10.1039/c3cp52047a. Epub 2013 Aug 30.

PMID:
23995025
[PubMed - indexed for MEDLINE]
2.

B-Z transition of (dA-T)(n) duplexes induced by a spermine porphyrin-conjugate via an intermediate DNA conformation.

Sasaki H, Sasaki S.

Chem Commun (Camb). 2013 Oct 11;49(79):9024-6. doi: 10.1039/c3cc45213a.

PMID:
23979223
[PubMed - indexed for MEDLINE]
3.

Porphyrins conjugated to DNA as CD reporters of the salt-induced B to Z-DNA transition.

Balaz M, Li BC, Steinkruger JD, Ellestad GA, Nakanishi K, Berova N.

Org Biomol Chem. 2006 May 21;4(10):1865-7. Epub 2006 Apr 21.

PMID:
16688331
[PubMed - indexed for MEDLINE]
4.

The Zα domain of fish PKZ converts DNA hairpin with d(GC)(n) inserts to Z-conformation.

Lu P, Deng S, Wu C, Zhu Y, Liu Y, Lin G, Yan Y, Hu C.

Acta Biochim Biophys Sin (Shanghai). 2013 Dec;45(12):1062-8. doi: 10.1093/abbs/gmt114. Epub 2013 Oct 10.

PMID:
24113090
[PubMed - indexed for MEDLINE]
5.

Incorporation of CC steps into Z-DNA: interplay between B-Z junction and Z-DNA helical formation.

Bothe JR, Lowenhaupt K, Al-Hashimi HM.

Biochemistry. 2012 Aug 28;51(34):6871-9. Epub 2012 Aug 17.

PMID:
22873788
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Chiroptical detection of condensed nickel(II)-Z-DNA in the presence of the B-DNA via porphyrin exciton coupled circular dichroism.

Choi JK, Sargsyan G, Shabbir-Hussain M, Holmes AE, Balaz M.

J Phys Chem B. 2011 Aug 25;115(33):10182-8. doi: 10.1021/jp2047213. Epub 2011 Aug 3.

PMID:
21774503
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Synthesis, properties, and NMR studies of a C8-phenylguanine modified oligonucleotide that preferentially adopts the Z DNA conformation.

Gannett PM, Heavner S, Daft JR, Shaughnessy KH, Epperson JD, Greenbaum NL.

Chem Res Toxicol. 2003 Oct;16(10):1385-94.

PMID:
14565779
[PubMed - indexed for MEDLINE]
8.

DNA as a one-dimensional chiral material: application to the structural transition between B form and Z form.

Okushima T, Kuratsuji H.

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Aug;84(2 Pt 1):021926. Epub 2011 Aug 22.

PMID:
21929037
[PubMed - indexed for MEDLINE]
9.

The spermine-bisaryl conjugate as a potent inducer of B- to Z-DNA transition.

Doi I, Tsuji G, Kawakami K, Nakagawa O, Taniguchi Y, Sasaki S.

Chemistry. 2010 Oct 18;16(39):11993-9. doi: 10.1002/chem.201000947.

PMID:
20827695
[PubMed - indexed for MEDLINE]
10.

Circular dichroism spectra of d(CGCGCGCGCGCG): evidence for intermediate models in the B-to-Z transition.

Grzeskowiak K, Ohishi H, Ivanov V.

Nucleic Acids Symp Ser (Oxf). 2005;(49):249-50.

PMID:
17150727
[PubMed - indexed for MEDLINE]
Free Article
11.

The role of methylation in the intrinsic dynamics of B- and Z-DNA.

Temiz NA, Donohue DE, Bacolla A, Luke BT, Collins JR.

PLoS One. 2012;7(4):e35558. doi: 10.1371/journal.pone.0035558. Epub 2012 Apr 17.

PMID:
22530050
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Polyamines stabilize left-handed Z-DNA: using X-ray crystallographic analysis, we have found a new type of polyamine (PA) that stabilizes left-handed Z-DNA.

Ohishi H, Odoko M, Grzeskowiak K, Hiyama Y, Tsukamoto K, Maezaki N, Ishida T, Tanaka T, Okabe N, Fukuyama K, Zhou DY, Nakatani K.

Biochem Biophys Res Commun. 2008 Feb 8;366(2):275-80. Epub 2007 Nov 20.

PMID:
18023271
[PubMed - indexed for MEDLINE]
13.

Metal binding induces conversion of B- to the hybrid B-Z-form in natural DNA.

Filimonova M, Gubskaya V, Davidov R, Garusov A, Nuretdinov I.

Int J Biol Macromol. 2008 Oct 1;43(3):289-94. doi: 10.1016/j.ijbiomac.2008.06.010. Epub 2008 Jul 3.

PMID:
18644405
[PubMed - indexed for MEDLINE]
14.

Chiroptical properties of anionic and cationic porphyrins and metalloporphyrins in complex with left-handed Z-DNA and right-handed B-DNA.

Choi JK, D'Urso A, Balaz M.

J Inorg Biochem. 2013 Oct;127:1-6. doi: 10.1016/j.jinorgbio.2013.05.018. Epub 2013 Jun 14.

PMID:
23831582
[PubMed - indexed for MEDLINE]
15.

Formation of sequence-independent Z-DNA induced by a ruthenium complex at low salt concentrations.

Wu Z, Tian T, Yu J, Weng X, Liu Y, Zhou X.

Angew Chem Int Ed Engl. 2011 Dec 9;50(50):11962-7. doi: 10.1002/anie.201104422. Epub 2011 Oct 18. No abstract available.

PMID:
22009837
[PubMed - indexed for MEDLINE]
16.

Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases.

Ha SC, Lowenhaupt K, Rich A, Kim YG, Kim KK.

Nature. 2005 Oct 20;437(7062):1183-6.

PMID:
16237447
[PubMed - indexed for MEDLINE]
17.

The conformational effect of para-substituted C8-arylguanine adducts on the B/Z-DNA equilibrium.

Vongsutilers V, Phillips DJ, Train BC, McKelvey GR, Thomsen NM, Shaughnessy KH, Lewis JP, Gannett PM.

Biophys Chem. 2011 Feb;154(1):41-8. doi: 10.1016/j.bpc.2010.12.006. Epub 2010 Dec 30.

PMID:
21255902
[PubMed - indexed for MEDLINE]
18.

Circular dichroism and conformational polymorphism of DNA.

Kypr J, Kejnovská I, Renciuk D, Vorlícková M.

Nucleic Acids Res. 2009 Apr;37(6):1713-25. doi: 10.1093/nar/gkp026. Epub 2009 Feb 3. Review.

PMID:
19190094
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Reversible B/Z-DNA transition under the low salt condition and non-B-form polydApolydT selectivity by a cubane-like europium-L-aspartic acid complex.

Zhang H, Yu H, Ren J, Qu X.

Biophys J. 2006 May 1;90(9):3203-7. Epub 2006 Feb 10.

PMID:
16473901
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

L-nucleotides and 8-methylguanine of d(C1m8G2C3G4C5LG6LC7G8C9G10)2 act cooperatively to promote a left-handed helix under physiological salt conditions.

Cherrak I, Mauffret O, Santamaria F, Hocquet A, Ghomi M, Rayner B, Fermandjian S.

Nucleic Acids Res. 2003 Dec 1;31(23):6986-95.

PMID:
14627831
[PubMed - indexed for MEDLINE]
Free PMC Article

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