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Results: 1 to 20 of 93

Related Citations for PubMed (Select 23969036)

1.

Oligonucleotide probes containing pyrimidine analogs reveal diminished hydrogen bonding capacity of the DNA adduct O⁶-methyl-G in DNA duplexes.

Angelov T, Dahlmann HA, Sturla SJ.

Bioorg Med Chem. 2013 Oct 15;21(20):6212-6. doi: 10.1016/j.bmc.2013.07.036. Epub 2013 Jul 26.

PMID:
23969036
2.

Hydrogen bonding or stacking interactions in differentiating duplex stability in oligonucleotides containing synthetic nucleoside probes for alkylated DNA.

Gahlon HL, Sturla SJ.

Chemistry. 2013 Aug 12;19(33):11062-7. doi: 10.1002/chem.201204593. Epub 2013 Jun 25.

PMID:
23801518
3.

New base pairing motifs. The synthesis and thermal stability of oligodeoxynucleotides containing imidazopyridopyrimidine nucleosides with the ability to form four hydrogen bonds.

Minakawa N, Kojima N, Hikishima S, Sasaki T, Kiyosue A, Atsumi N, Ueno Y, Matsuda A.

J Am Chem Soc. 2003 Aug 20;125(33):9970-82.

PMID:
12914460
4.

Effect of Watson-Crick and Hoogsteen base pairing on the conformational stability of C8-phenoxyl-2'-deoxyguanosine adducts.

Millen AL, Churchill CD, Manderville RA, Wetmore SD.

J Phys Chem B. 2010 Oct 14;114(40):12995-3004. doi: 10.1021/jp105817p.

PMID:
20853889
5.
7.

New imidazopyridopyrimidine:naphthyridine base-pairing motif, ImN(N):NaO(O), consisting of a DAAD:ADDA hydrogen bonding pattern, markedly stabilize DNA duplexes.

Kuramoto K, Tarashima N, Hirama Y, Kikuchi Y, Minakawa N, Matsuda A.

Chem Commun (Camb). 2011 Oct 14;47(38):10818-20. doi: 10.1039/c1cc13805g. Epub 2011 Aug 24.

PMID:
21863185
8.

Fluorescent properties and conformational preferences of C-linked phenolic-DNA adducts.

Omumi A, Millen AL, Wetmore SD, Manderville RA.

Chem Res Toxicol. 2011 Oct 17;24(10):1694-709. doi: 10.1021/tx200247f. Epub 2011 Sep 25.

PMID:
21905681
13.

yDNA versus xDNA pyrimidine nucleobases: computational evidence for dependence of duplex stability on spacer location.

Lait LA, Rutledge LR, Millen AL, Wetmore SD.

J Phys Chem B. 2008 Oct 2;112(39):12526-36. doi: 10.1021/jp805547p. Epub 2008 Sep 5.

PMID:
18771305
14.

Nearest-neighbor thermodynamics of deoxyinosine pairs in DNA duplexes.

Watkins NE Jr, SantaLucia J Jr.

Nucleic Acids Res. 2005 Nov 1;33(19):6258-67. Print 2005.

15.
16.

The thermodynamics of 3'-terminal pyrene and guanosine for the design of isoenergetic 2'-O-methyl-RNA-LNA chimeric oligonucleotide probes of RNA structure.

Pasternak A, Kierzek E, Pasternak K, Fratczak A, Turner DH, Kierzek R.

Biochemistry. 2008 Feb 5;47(5):1249-58. doi: 10.1021/bi701758z. Epub 2008 Jan 5.

PMID:
18177022
18.
19.

Specific and nonspecific hybridization of oligonucleotide probes on microarrays.

Binder H, Preibisch S.

Biophys J. 2005 Jul;89(1):337-52. Epub 2005 Apr 15.

20.
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