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Results: 1 to 20 of 119

1.

Cross-platform compatibility of Hi-Plex, a streamlined approach for targeted massively parallel sequencing.

Nguyen-Dumont T, Pope BJ, Hammet F, Mahmoodi M, Tsimiklis H, Southey MC, Park DJ.

Anal Biochem. 2013 Nov 15;442(2):127-9. doi: 10.1016/j.ab.2013.07.046. Epub 2013 Aug 8.

PMID:
23933242
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

A high-plex PCR approach for massively parallel sequencing.

Nguyen-Dumont T, Pope BJ, Hammet F, Southey MC, Park DJ.

Biotechniques. 2013 Aug;55(2):69-74. doi: 10.2144/000114052.

PMID:
23931594
[PubMed - indexed for MEDLINE]
Free Article
3.

Hi-Plex for high-throughput mutation screening: application to the breast cancer susceptibility gene PALB2.

Nguyen-Dumont T, Teo ZL, Pope BJ, Hammet F, Mahmoodi M, Tsimiklis H, Sabbaghian N, Tischkowitz M, Foulkes WD; Kathleen Cuningham Foundation Consortium for research into Familial Breast cancer (kConFab), Giles GG, Hopper JL; Australian Breast Cancer Family Registry, Southey MC, Park DJ.

BMC Med Genomics. 2013 Nov 8;6:48. doi: 10.1186/1755-8794-6-48.

PMID:
24206657
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A low-cost exon capture method suitable for large-scale screening of genetic deafness by the massively-parallel sequencing approach.

Tang W, Qian D, Ahmad S, Mattox D, Todd NW, Han H, Huang S, Li Y, Wang Y, Li H, Lin X.

Genet Test Mol Biomarkers. 2012 Jun;16(6):536-42. doi: 10.1089/gtmb.2011.0187. Epub 2012 Apr 5.

PMID:
22480152
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

FAST-SeqS: a simple and efficient method for the detection of aneuploidy by massively parallel sequencing.

Kinde I, Papadopoulos N, Kinzler KW, Vogelstein B.

PLoS One. 2012;7(7):e41162. doi: 10.1371/journal.pone.0041162. Epub 2012 Jul 18.

PMID:
22815955
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Abridged adapter primers increase the target scope of Hi-Plex.

Nguyen-Dumont T, Hammet F, Mahmoodi M, Pope BJ, Giles GG, Hopper GG, Southey MC, Park DJ.

Biotechniques. 2015 Jan 1;58(1):33-6. doi: 10.2144/000114247. eCollection 2014.

PMID:
25605578
[PubMed - in process]
Free Article
7.

Preparation of fragment libraries for next-generation sequencing on the applied biosystems SOLiD platform.

Yegnasubramanian S.

Methods Enzymol. 2013;529:185-200. doi: 10.1016/B978-0-12-418687-3.00015-X.

PMID:
24011046
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The next generation of molecular markers from massively parallel sequencing of pooled DNA samples.

Futschik A, Schlötterer C.

Genetics. 2010 Sep;186(1):207-18. doi: 10.1534/genetics.110.114397. Epub 2010 May 10.

PMID:
20457880
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.

Oyola SO, Otto TD, Gu Y, Maslen G, Manske M, Campino S, Turner DJ, Macinnis B, Kwiatkowski DP, Swerdlow HP, Quail MA.

BMC Genomics. 2012 Jan 3;13:1. doi: 10.1186/1471-2164-13-1.

PMID:
22214261
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Preparing a re-sequencing DNA library of 2 cancer candidate genes using the ligation-by-amplification protocol by two PCR reactions.

Su Y, Lin L, Tian G, Chen C, Liu T, Xu X, Qi X, Zhang X, Yang H.

Sci China C Life Sci. 2009 May;52(5):483-91. doi: 10.1007/s11427-009-0066-8. Epub 2009 May 27.

PMID:
19471873
[PubMed - indexed for MEDLINE]
11.

Sequence artefacts in a prospective series of formalin-fixed tumours tested for mutations in hotspot regions by massively parallel sequencing.

Wong SQ, Li J, Tan AY, Vedururu R, Pang JM, Do H, Ellul J, Doig K, Bell A, MacArthur GA, Fox SB, Thomas DM, Fellowes A, Parisot JP, Dobrovic A; CANCER 2015 Cohort.

BMC Med Genomics. 2014 May 13;7:23. doi: 10.1186/1755-8794-7-23.

PMID:
24885028
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Pre-capture multiplexing improves efficiency and cost-effectiveness of targeted genomic enrichment.

Shearer AE, Hildebrand MS, Ravi H, Joshi S, Guiffre AC, Novak B, Happe S, LeProust EM, Smith RJ.

BMC Genomics. 2012 Nov 14;13:618. doi: 10.1186/1471-2164-13-618.

PMID:
23148716
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

A programmable method for massively parallel targeted sequencing.

Hopmans ES, Natsoulis G, Bell JM, Grimes SM, Sieh W, Ji HP.

Nucleic Acids Res. 2014 Jun;42(10):e88. doi: 10.1093/nar/gku282. Epub 2014 Apr 29.

PMID:
24782526
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Massively-parallel sequencing of genes on a single chromosome: a comparison of solution hybrid selection and flow sorting.

Teer JK, Johnston JJ, Anzick SL, Pineda M, Stone G; NISC Comparative Sequencing Program, Meltzer PS, Mullikin JC, Biesecker LG.

BMC Genomics. 2013 Apr 15;14:253. doi: 10.1186/1471-2164-14-253.

PMID:
23586822
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Assessment of target enrichment platforms using massively parallel sequencing for the mutation detection for congenital muscular dystrophy.

Valencia CA, Rhodenizer D, Bhide S, Chin E, Littlejohn MR, Keong LM, Rutkowski A, Bonnemann C, Hegde M.

J Mol Diagn. 2012 May-Jun;14(3):233-46. doi: 10.1016/j.jmoldx.2012.01.009. Epub 2012 Mar 16.

PMID:
22426012
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Hybrid selection of discrete genomic intervals on custom-designed microarrays for massively parallel sequencing.

Hodges E, Rooks M, Xuan Z, Bhattacharjee A, Benjamin Gordon D, Brizuela L, Richard McCombie W, Hannon GJ.

Nat Protoc. 2009;4(6):960-74. doi: 10.1038/nprot.2009.68. Epub 2009 May 28.

PMID:
19478811
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Anchored hybrid enrichment for massively high-throughput phylogenomics.

Lemmon AR, Emme SA, Lemmon EM.

Syst Biol. 2012 Oct;61(5):727-44. doi: 10.1093/sysbio/sys049. Epub 2012 May 17.

PMID:
22605266
[PubMed - indexed for MEDLINE]
18.

Library preparation and multiplex capture for massive parallel sequencing applications made efficient and easy.

Neiman M, Sundling S, Grönberg H, Hall P, Czene K, Lindberg J, Klevebring D.

PLoS One. 2012;7(11):e48616. doi: 10.1371/journal.pone.0048616. Epub 2012 Nov 5.

PMID:
23139805
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Construction of RNA-Seq libraries from large and microscopic tissues for the Illumina sequencing platform.

Atamian HS, Kaloshian I.

Methods Mol Biol. 2012;883:47-57. doi: 10.1007/978-1-61779-839-9_3.

PMID:
22589123
[PubMed - indexed for MEDLINE]
20.

Next-generation sequencing for high-throughput molecular ecology: a step-by-step protocol for targeted multilocus genotyping by pyrosequencing.

Puritz JB, Toonen RJ.

Methods Mol Biol. 2013;1006:89-99. doi: 10.1007/978-1-62703-389-3_6.

PMID:
23546785
[PubMed - indexed for MEDLINE]

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