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Developing molecular tools and insights into the Penstemon genome using genomic reduction and next-generation sequencing.

Dockter RB, Elzinga DB, Geary B, Maughan PJ, Johnson LA, Tumbleson D, Franke J, Dockter K, Stevens MR.

BMC Genet. 2013 Aug 8;14:66. doi: 10.1186/1471-2156-14-66.


A survey of Penstemon's genome size.

Broderick SR, Stevens MR, Geary B, Love SL, Jellen EN, Dockter RB, Daley SL, Lindgren DT.

Genome. 2011 Feb;54(2):160-73. doi: 10.1139/G10-106.


Next generation DNA sequencing technology delivers valuable genetic markers for the genomic orphan legume species, Bituminaria bituminosa.

Pazos-Navarro M, Dabauza M, Correal E, Hanson K, Teakle N, Real D, Nelson MN.

BMC Genet. 2011 Dec 15;12:104. doi: 10.1186/1471-2156-12-104.


Molecular marker development from transcript sequences and germplasm evaluation for cultivated peanut (Arachis hypogaea L.).

Peng Z, Gallo M, Tillman BL, Rowland D, Wang J.

Mol Genet Genomics. 2016 Feb;291(1):363-81. doi: 10.1007/s00438-015-1115-6. Epub 2015 Sep 11.


Genetic diversity of peanut (Arachis hypogaea L.) and its wild relatives based on the analysis of hypervariable regions of the genome.

Moretzsohn Mde C, Hopkins MS, Mitchell SE, Kresovich S, Valls JF, Ferreira ME.

BMC Plant Biol. 2004 Jul 14;4:11.


A SSR-based composite genetic linkage map for the cultivated peanut (Arachis hypogaea L.) genome.

Hong Y, Chen X, Liang X, Liu H, Zhou G, Li S, Wen S, Holbrook CC, Guo B.

BMC Plant Biol. 2010 Jan 27;10:17. doi: 10.1186/1471-2229-10-17.


A nuclear phylogenetic analysis: SNPs, indels and SSRs deliver new insights into the relationships in the 'true citrus fruit trees' group (Citrinae, Rutaceae) and the origin of cultivated species.

Garcia-Lor A, Curk F, Snoussi-Trifa H, Morillon R, Ancillo G, Luro F, Navarro L, Ollitrault P.

Ann Bot. 2013 Jan;111(1):1-19. doi: 10.1093/aob/mcs227. Epub 2012 Oct 26.


Development and validation of genic-SSR markers in sesame by RNA-seq.

Zhang H, Wei L, Miao H, Zhang T, Wang C.

BMC Genomics. 2012 Jul 16;13:316. doi: 10.1186/1471-2164-13-316.


Development of Genomic Microsatellite Markers in Carthamus tinctorius L. (Safflower) Using Next Generation Sequencing and Assessment of Their Cross-Species Transferability and Utility for Diversity Analysis.

Ambreen H, Kumar S, Variath MT, Joshi G, Bali S, Agarwal M, Kumar A, Jagannath A, Goel S.

PLoS One. 2015 Aug 19;10(8):e0135443. doi: 10.1371/journal.pone.0135443. eCollection 2015.


Generation and mapping of AFLP, SSRs and SNPs in Lycopersicon esculentum.

Suliman-Pollatschek S, Kashkush K, Shats H, Hillel J, Lavi U.

Cell Mol Biol Lett. 2002;7(2A):583-97.


Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.).

Cavagnaro PF, Senalik DA, Yang L, Simon PW, Harkins TT, Kodira CD, Huang S, Weng Y.

BMC Genomics. 2010 Oct 15;11:569. doi: 10.1186/1471-2164-11-569.


Rapid microsatellite development for tree peony and its implications.

Gao Z, Wu J, Liu Z, Wang L, Ren H, Shu Q.

BMC Genomics. 2013 Dec 16;14:886. doi: 10.1186/1471-2164-14-886.


Development of genome-wide InDel markers and their integration with SSR, DArT and SNP markers in single barley map.

Zhou G, Zhang Q, Tan C, Zhang XQ, Li C.

BMC Genomics. 2015 Oct 16;16:804. doi: 10.1186/s12864-015-2027-x.


Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.

Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW.

BMC Genomics. 2011 Aug 1;12:386. doi: 10.1186/1471-2164-12-386.


Development of microsatellite markers from an enriched genomic library for genetic analysis of melon (Cucumis melo L.).

Ritschel PS, Lins TC, Tristan RL, Buso GS, Buso JA, Ferreira ME.

BMC Plant Biol. 2004 May 18;4:9.


A second generation framework for the analysis of microsatellites in expressed sequence tags and the development of EST-SSR markers for a conifer, Cryptomeria japonica.

Ueno S, Moriguchi Y, Uchiyama K, Ujino-Ihara T, Futamura N, Sakurai T, Shinohara K, Tsumura Y.

BMC Genomics. 2012 Apr 16;13:136. doi: 10.1186/1471-2164-13-136.


Identification, characterization and utilization of unigene derived microsatellite markers in tea (Camellia sinensis L.).

Sharma RK, Bhardwaj P, Negi R, Mohapatra T, Ahuja PS.

BMC Plant Biol. 2009 May 11;9:53. doi: 10.1186/1471-2229-9-53.

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