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Results: 1 to 20 of 103

1.

Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding.

Ji Y, Ashton L, Pedley SM, Edwards DP, Tang Y, Nakamura A, Kitching R, Dolman PM, Woodcock P, Edwards FA, Larsen TH, Hsu WW, Benedick S, Hamer KC, Wilcove DS, Bruce C, Wang X, Levi T, Lott M, Emerson BC, Yu DW.

Ecol Lett. 2013 Oct;16(10):1245-57. doi: 10.1111/ele.12162. Epub 2013 Aug 4.

PMID:
23910579
[PubMed - indexed for MEDLINE]
2.

Towards next-generation biodiversity assessment using DNA metabarcoding.

Taberlet P, Coissac E, Pompanon F, Brochmann C, Willerslev E.

Mol Ecol. 2012 Apr;21(8):2045-50. doi: 10.1111/j.1365-294X.2012.05470.x.

PMID:
22486824
[PubMed - indexed for MEDLINE]
3.

Bioinformatic challenges for DNA metabarcoding of plants and animals.

Coissac E, Riaz T, Puillandre N.

Mol Ecol. 2012 Apr;21(8):1834-47. doi: 10.1111/j.1365-294X.2012.05550.x. Review.

PMID:
22486822
[PubMed - indexed for MEDLINE]
4.

Testing three pipelines for 18S rDNA-based metabarcoding of soil faunal diversity.

Yang C, Ji Y, Wang X, Yang C, Yu DW.

Sci China Life Sci. 2013 Jan;56(1):73-81. doi: 10.1007/s11427-012-4423-7. Epub 2012 Dec 27.

PMID:
23269552
[PubMed - indexed for MEDLINE]
5.

Assessing biodiversity of a freshwater benthic macroinvertebrate community through non-destructive environmental barcoding of DNA from preservative ethanol.

Hajibabaei M, Spall JL, Shokralla S, van Konynenburg S.

BMC Ecol. 2012 Dec 23;12:28. doi: 10.1186/1472-6785-12-28.

PMID:
23259585
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Improving environmental and biodiversity monitoring in the Baltic Sea using DNA barcoding of Chironomidae (Diptera).

Brodin Y, Ejdung G, Strandberg J, Lyrholm T.

Mol Ecol Resour. 2013 Nov;13(6):996-1004. doi: 10.1111/1755-0998.12053. Epub 2012 Dec 24.

PMID:
23280321
[PubMed - indexed for MEDLINE]
7.

Joining inventory by parataxonomists with DNA barcoding of a large complex tropical conserved wildland in northwestern Costa Rica.

Janzen DH, Hallwachs W.

PLoS One. 2011;6(8):e18123. doi: 10.1371/journal.pone.0018123. Epub 2011 Aug 16.

PMID:
21857894
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Environmental DNA.

Taberlet P, Coissac E, Hajibabaei M, Rieseberg LH.

Mol Ecol. 2012 Apr;21(8):1789-93. doi: 10.1111/j.1365-294X.2012.05542.x. No abstract available.

PMID:
22486819
[PubMed - indexed for MEDLINE]
9.

[Ecological indicators of habitat and biodiversity in a Neotropical landscape: multitaxonomic perspective].

González-Valdivia N, Ochoa-Gaona S, Pozo C, Ferguson BG, Rangel-Ruiz LJ, Arriaga-Weiss SL, Ponce-Mendoza A, Kampichler C.

Rev Biol Trop. 2011 Sep;59(3):1433-51. Spanish.

PMID:
22017143
[PubMed - indexed for MEDLINE]
10.

Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos.

Hajibabaei M, Shokralla S, Zhou X, Singer GA, Baird DJ.

PLoS One. 2011 Apr 13;6(4):e17497. doi: 10.1371/journal.pone.0017497.

PMID:
21533287
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

DNA from soil mirrors plant taxonomic and growth form diversity.

Yoccoz NG, Bråthen KA, Gielly L, Haile J, Edwards ME, Goslar T, Von Stedingk H, Brysting AK, Coissac E, Pompanon F, Sønstebø JH, Miquel C, Valentini A, De Bello F, Chave J, Thuiller W, Wincker P, Cruaud C, Gavory F, Rasmussen M, Gilbert MT, Orlando L, Brochmann C, Willerslev E, Taberlet P.

Mol Ecol. 2012 Aug;21(15):3647-55. doi: 10.1111/j.1365-294X.2012.05545.x. Epub 2012 Apr 16.

PMID:
22507540
[PubMed - indexed for MEDLINE]
12.

Assessing conservation values: biodiversity and endemicity in tropical land use systems.

Waltert M, Bobo KS, Kaupa S, Montoya ML, Nsanyi MS, Fermon H.

PLoS One. 2011 Jan 27;6(1):e16238. doi: 10.1371/journal.pone.0016238.

PMID:
21298054
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Scientific contributions of extensive biodiversity monitoring.

Couvet D, Devictor V, Jiguet F, Julliard R.

C R Biol. 2011 May;334(5-6):370-7. doi: 10.1016/j.crvi.2011.02.007. Epub 2011 Apr 30. Review.

PMID:
21640945
[PubMed - indexed for MEDLINE]
14.

How can a knowledge of the past help to conserve the future? Biodiversity conservation and the relevance of long-term ecological studies.

Willis KJ, Araújo MB, Bennett KD, Figueroa-Rangel B, Froyd CA, Myers N.

Philos Trans R Soc Lond B Biol Sci. 2007 Feb 28;362(1478):175-86. Review. Erratum in: Philos Trans R Soc Lond B Biol Sci. 2007 Dec 29;362(1488):2367.

PMID:
17255027
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A review of climate-change adaptation strategies for wildlife management and biodiversity conservation.

Mawdsley JR, O'Malley R, Ojima DS.

Conserv Biol. 2009 Oct;23(5):1080-9. doi: 10.1111/j.1523-1739.2009.01264.x. Epub 2009 Jun 22. Review.

PMID:
19549219
[PubMed - indexed for MEDLINE]
16.

DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match.

Deagle BE, Jarman SN, Coissac E, Pompanon F, Taberlet P.

Biol Lett. 2014 Sep;10(9). pii: 20140562. doi: 10.1098/rsbl.2014.0562.

PMID:
25209199
[PubMed - in process]
17.

Satellite detection of bird communities in tropical countryside.

Ranganathan J, Chan KM, Daily GC.

Ecol Appl. 2007 Jul;17(5):1499-510.

PMID:
17708224
[PubMed - indexed for MEDLINE]
18.

From barcoding single individuals to metabarcoding biological communities: towards an integrative approach to the study of global biodiversity.

Cristescu ME.

Trends Ecol Evol. 2014 Aug 27. pii: S0169-5347(14)00175-X. doi: 10.1016/j.tree.2014.08.001. [Epub ahead of print] Review.

PMID:
25175416
[PubMed - as supplied by publisher]
19.

The future of environmental DNA in ecology.

Yoccoz NG.

Mol Ecol. 2012 Apr;21(8):2031-8. doi: 10.1111/j.1365-294X.2012.05505.x. Review.

PMID:
22486823
[PubMed - indexed for MEDLINE]
20.

Detection of a diverse marine fish fauna using environmental DNA from seawater samples.

Thomsen PF, Kielgast J, Iversen LL, Møller PR, Rasmussen M, Willerslev E.

PLoS One. 2012;7(8):e41732. doi: 10.1371/journal.pone.0041732. Epub 2012 Aug 29.

PMID:
22952584
[PubMed - indexed for MEDLINE]
Free PMC Article

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