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Items: 1 to 20 of 105

1.

A proof-of-concept study: exon-level expression profiling and alternative splicing in autism using lymphoblastoid cell lines.

Talebizadeh Z, Aldenderfer R, Wen Chen X.

Psychiatr Genet. 2014 Feb;24(1):1-9. doi: 10.1097/YPG.0b013e3283635526.

PMID:
23838881
2.

Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.

Gardina PJ, Clark TA, Shimada B, Staples MK, Yang Q, Veitch J, Schweitzer A, Awad T, Sugnet C, Dee S, Davies C, Williams A, Turpaz Y.

BMC Genomics. 2006 Dec 27;7:325.

3.

Feasibility and relevance of examining lymphoblastoid cell lines to study role of microRNAs in autism.

Talebizadeh Z, Butler MG, Theodoro MF.

Autism Res. 2008 Aug;1(4):240-50. doi: 10.1002/aur.33. Review. Erratum in: Autism Res. 2008 Oct;1(5):307.

4.

Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.

Ha KCh, Coulombe-Huntington J, Majewski J.

BMC Genomics. 2009 Nov 12;10:519. doi: 10.1186/1471-2164-10-519.

5.

Differentially expressed alternatively spliced genes in malignant pleural mesothelioma identified using massively parallel transcriptome sequencing.

Dong L, Jensen RV, De Rienzo A, Gordon GJ, Xu Y, Sugarbaker DJ, Bueno R.

BMC Med Genet. 2009 Dec 31;10:149. doi: 10.1186/1471-2350-10-149.

6.

Expression and alternative splicing of folate pathway genes in HapMap lymphoblastoid cell lines.

Duan S, Huang RS, Zhang W, Mi S, Bleibel WK, Kistner EO, Cox NJ, Dolan ME.

Pharmacogenomics. 2009 Apr;10(4):549-63. doi: 10.2217/pgs.09.8.

7.

Exon-based clustering of murine breast tumor transcriptomes reveals alternative exons whose expression is associated with metastasis.

Dutertre M, Lacroix-Triki M, Driouch K, de la Grange P, Gratadou L, Beck S, Millevoi S, Tazi J, Lidereau R, Vagner S, Auboeuf D.

Cancer Res. 2010 Feb 1;70(3):896-905. doi: 10.1158/0008-5472.CAN-09-2703. Epub 2010 Jan 26.

8.

Using an exon microarray to identify a global profile of gene expression and alternative splicing in K562 cells exposed to sodium valproate.

Zhang XZ, Yin AH, Zhu XY, Ding Q, Wang CH, Chen YX.

Oncol Rep. 2012 Apr;27(4):1258-65. doi: 10.3892/or.2011.1601. Epub 2011 Dec 21.

9.

Splicing factor and exon profiling across human tissues.

de la Grange P, Gratadou L, Delord M, Dutertre M, Auboeuf D.

Nucleic Acids Res. 2010 May;38(9):2825-38. doi: 10.1093/nar/gkq008. Epub 2010 Jan 27.

10.

Genome-wide expression profiling of lymphoblastoid cell lines distinguishes different forms of autism and reveals shared pathways.

Nishimura Y, Martin CL, Vazquez-Lopez A, Spence SJ, Alvarez-Retuerto AI, Sigman M, Steindler C, Pellegrini S, Schanen NC, Warren ST, Geschwind DH.

Hum Mol Genet. 2007 Jul 15;16(14):1682-98. Epub 2007 May 21.

11.

Exon-level transcriptome profiling in murine breast cancer reveals splicing changes specific to tumors with different metastatic abilities.

Bemmo A, Dias C, Rose AA, Russo C, Siegel P, Majewski J.

PLoS One. 2010 Aug 6;5(8):e11981. doi: 10.1371/journal.pone.0011981.

12.

Transcription and splicing regulation in human umbilical vein endothelial cells under hypoxic stress conditions by exon array.

Hang X, Li P, Li Z, Qu W, Yu Y, Li H, Shen Z, Zheng H, Gao Y, Wu Y, Deng M, Sun Z, Zhang C.

BMC Genomics. 2009 Mar 25;10:126. doi: 10.1186/1471-2164-10-126.

14.

Comprehensive analysis of alternative splicing and functionality in neuronal differentiation of P19 cells.

Suzuki H, Osaki K, Sano K, Alam AH, Nakamura Y, Ishigaki Y, Kawahara K, Tsukahara T.

PLoS One. 2011 Feb 18;6(2):e16880. doi: 10.1371/journal.pone.0016880.

15.

Complexity of bidirectional transcription and alternative splicing at human RCAN3 locus.

Facchin F, Vitale L, Bianconi E, Piva F, Frabetti F, Strippoli P, Casadei R, Pelleri MC, Piovesan A, Canaider S.

PLoS One. 2011;6(9):e24508. doi: 10.1371/journal.pone.0024508. Epub 2011 Sep 22.

16.

Heritability of alternative splicing in the human genome.

Kwan T, Benovoy D, Dias C, Gurd S, Serre D, Zuzan H, Clark TA, Schweitzer A, Staples MK, Wang H, Blume JE, Hudson TJ, Sladek R, Majewski J.

Genome Res. 2007 Aug;17(8):1210-8.

17.

Transcriptomic analysis of autistic brain reveals convergent molecular pathology.

Voineagu I, Wang X, Johnston P, Lowe JK, Tian Y, Horvath S, Mill J, Cantor RM, Blencowe BJ, Geschwind DH.

Nature. 2011 May 25;474(7351):380-4. doi: 10.1038/nature10110.

18.

A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.

Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.

Theor Biol Med Model. 2006 Apr 7;3:19.

19.

Identifying differential exon splicing using linear models and correlation coefficients.

Shah SH, Pallas JA.

BMC Bioinformatics. 2009 Jan 20;10:26. doi: 10.1186/1471-2105-10-26.

20.

Analysis of RBFOX1 gene expression in lymphoblastoid cell lines of Italian discordant autism spectrum disorders sib-pairs.

Prandini P, Zusi C, Malerba G, Itan, Pignatti PF, Trabetti E.

Mol Cell Probes. 2014 Oct-Dec;28(5-6):242-5. doi: 10.1016/j.mcp.2014.05.001. Epub 2014 Jun 3.

PMID:
24938762
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