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Results: 1 to 20 of 111

1.

Rapid evolution of the human gut virome.

Minot S, Bryson A, Chehoud C, Wu GD, Lewis JD, Bushman FD.

Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12450-5. doi: 10.1073/pnas.1300833110. Epub 2013 Jul 8.

PMID:
23836644
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The human gut virome: inter-individual variation and dynamic response to diet.

Minot S, Sinha R, Chen J, Li H, Keilbaugh SA, Wu GD, Lewis JD, Bushman FD.

Genome Res. 2011 Oct;21(10):1616-25. doi: 10.1101/gr.122705.111. Epub 2011 Aug 31.

PMID:
21880779
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

New dimensions of the virus world discovered through metagenomics.

Kristensen DM, Mushegian AR, Dolja VV, Koonin EV.

Trends Microbiol. 2010 Jan;18(1):11-9. doi: 10.1016/j.tim.2009.11.003. Epub 2009 Nov 26.

PMID:
19942437
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Diverse CRISPRs evolving in human microbiomes.

Rho M, Wu YW, Tang H, Doak TG, Ye Y.

PLoS Genet. 2012;8(6):e1002441. doi: 10.1371/journal.pgen.1002441. Epub 2012 Jun 13.

PMID:
22719260
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Gnotobiotic mouse model of phage-bacterial host dynamics in the human gut.

Reyes A, Wu M, McNulty NP, Rohwer FL, Gordon JI.

Proc Natl Acad Sci U S A. 2013 Dec 10;110(50):20236-41. doi: 10.1073/pnas.1319470110. Epub 2013 Nov 20.

PMID:
24259713
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Phage-bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome.

Berg Miller ME, Yeoman CJ, Chia N, Tringe SG, Angly FE, Edwards RA, Flint HJ, Lamed R, Bayer EA, White BA.

Environ Microbiol. 2012 Jan;14(1):207-27. doi: 10.1111/j.1462-2920.2011.02593.x. Epub 2011 Oct 17.

PMID:
22004549
[PubMed - indexed for MEDLINE]
7.

Virome profiling of bats from Myanmar by metagenomic analysis of tissue samples reveals more novel Mammalian viruses.

He B, Li Z, Yang F, Zheng J, Feng Y, Guo H, Li Y, Wang Y, Su N, Zhang F, Fan Q, Tu C.

PLoS One. 2013 Apr 22;8(4):e61950. doi: 10.1371/journal.pone.0061950. Print 2013. Erratum in: PLoS One. 2013;8(6). doi:10.1371/annotation/68f77773-a2a0-4bfe-b5e6-950dc30b79f9.

PMID:
23630620
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Using CRISPRs as a metagenomic tool to identify microbial hosts of a diffuse flow hydrothermal vent viral assemblage.

Anderson RE, Brazelton WJ, Baross JA.

FEMS Microbiol Ecol. 2011 Jul;77(1):120-33. doi: 10.1111/j.1574-6941.2011.01090.x. Epub 2011 Apr 11.

PMID:
21410492
[PubMed - indexed for MEDLINE]
9.

Viral evolution: Variation in the gut virome.

Hofer U.

Nat Rev Microbiol. 2013 Sep;11(9):596. doi: 10.1038/nrmicro3092. Epub 2013 Jul 22. No abstract available.

PMID:
23872943
[PubMed - indexed for MEDLINE]
10.

Viral metagenomics analysis of planktonic viruses in East Lake, Wuhan, China.

Ge X, Wu Y, Wang M, Wang J, Wu L, Yang X, Zhang Y, Shi Z.

Virol Sin. 2013 Oct;28(5):280-90. doi: 10.1007/s12250-013-3365-y. Epub 2013 Sep 30.

PMID:
24132758
[PubMed - indexed for MEDLINE]
11.

Metagenomics of rumen bacteriophage from thirteen lactating dairy cattle.

Ross EM, Petrovski S, Moate PJ, Hayes BJ.

BMC Microbiol. 2013 Nov 1;13:242. doi: 10.1186/1471-2180-13-242.

PMID:
24180266
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome reads.

Roux S, Krupovic M, Poulet A, Debroas D, Enault F.

PLoS One. 2012;7(7):e40418. doi: 10.1371/journal.pone.0040418. Epub 2012 Jul 11.

PMID:
22808158
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Discovery of a novel single-stranded DNA virus from a sea turtle fibropapilloma by using viral metagenomics.

Ng TF, Manire C, Borrowman K, Langer T, Ehrhart L, Breitbart M.

J Virol. 2009 Mar;83(6):2500-9. doi: 10.1128/JVI.01946-08. Epub 2008 Dec 30.

PMID:
19116258
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Metagenomic analysis of viral communities in (hado)pelagic sediments.

Yoshida M, Takaki Y, Eitoku M, Nunoura T, Takai K.

PLoS One. 2013;8(2):e57271. doi: 10.1371/journal.pone.0057271. Epub 2013 Feb 27.

PMID:
23468952
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Conservation of gene cassettes among diverse viruses of the human gut.

Minot S, Wu GD, Lewis JD, Bushman FD.

PLoS One. 2012;7(8):e42342. doi: 10.1371/journal.pone.0042342. Epub 2012 Aug 10.

PMID:
22900013
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Viral diversity threshold for adaptive immunity in prokaryotes.

Weinberger AD, Wolf YI, Lobkovsky AE, Gilmore MS, Koonin EV.

MBio. 2012 Dec 4;3(6):e00456-12. doi: 10.1128/mBio.00456-12.

PMID:
23221803
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Hypervariable loci in the human gut virome.

Minot S, Grunberg S, Wu GD, Lewis JD, Bushman FD.

Proc Natl Acad Sci U S A. 2012 Mar 6;109(10):3962-6. doi: 10.1073/pnas.1119061109. Epub 2012 Feb 21.

PMID:
22355105
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Metagenomic analysis of double-stranded DNA viruses in healthy adults.

Wylie KM, Mihindukulasuriya KA, Zhou Y, Sodergren E, Storch GA, Weinstock GM.

BMC Biol. 2014 Sep 10;12(1):71. [Epub ahead of print]

PMID:
25212266
[PubMed - as supplied by publisher]
Free Article
19.

Virus-host and CRISPR dynamics in Archaea-dominated hypersaline Lake Tyrrell, Victoria, Australia.

Emerson JB, Andrade K, Thomas BC, Norman A, Allen EE, Heidelberg KB, Banfield JF.

Archaea. 2013;2013:370871. doi: 10.1155/2013/370871. Epub 2013 Jun 18.

PMID:
23853523
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Assessing the diversity and specificity of two freshwater viral communities through metagenomics.

Roux S, Enault F, Robin A, Ravet V, Personnic S, Theil S, Colombet J, Sime-Ngando T, Debroas D.

PLoS One. 2012;7(3):e33641. doi: 10.1371/journal.pone.0033641. Epub 2012 Mar 14.

PMID:
22432038
[PubMed - indexed for MEDLINE]
Free PMC Article

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