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Items: 1 to 20 of 104

1.

Understanding the regulatory and transcriptional complexity of the genome through structure.

Mercer TR, Mattick JS.

Genome Res. 2013 Jul;23(7):1081-8. doi: 10.1101/gr.156612.113. Review.

2.

Nuclear structure-gene expression interrelationships: implications for aberrant gene expression in cancer.

Stein GS, Montecino M, van Wijnen AJ, Stein JL, Lian JB.

Cancer Res. 2000 Apr 15;60(8):2067-76. Review.

3.
4.

Chromosome territories, interchromatin domain compartment, and nuclear matrix: an integrated view of the functional nuclear architecture.

Cremer T, Kreth G, Koester H, Fink RH, Heintzmann R, Cremer M, Solovei I, Zink D, Cremer C.

Crit Rev Eukaryot Gene Expr. 2000;10(2):179-212. Review.

PMID:
11186332
5.

Interrelationships of transcriptional machinery with nuclear architecture.

Stein GS, van Wijnen AJ, Stein JL, Lian JB.

Crit Rev Eukaryot Gene Expr. 1999;9(3-4):183-90. Review.

PMID:
10651235
6.

The sperm nucleus: chromatin, RNA, and the nuclear matrix.

Johnson GD, Lalancette C, Linnemann AK, Leduc F, Boissonneault G, Krawetz SA.

Reproduction. 2011 Jan;141(1):21-36. doi: 10.1530/REP-10-0322. Epub 2010 Sep 27. Review.

7.

Nuclear architecture: Is it important for genome function and can we prove it?

Mateos-Langerak J, Goetze S, Leonhardt H, Cremer T, van Driel R, Lanctôt C.

J Cell Biochem. 2007 Dec 1;102(5):1067-75. Review.

PMID:
17786936
8.

Cell biology of the trypanosome genome.

Daniels JP, Gull K, Wickstead B.

Microbiol Mol Biol Rev. 2010 Dec;74(4):552-69. doi: 10.1128/MMBR.00024-10. Review.

9.

The osteocalcin gene: a model for multiple parameters of skeletal-specific transcriptional control.

Stein GS, Lian JB, van Wijnen AJ, Stein JL.

Mol Biol Rep. 1997 Aug;24(3):185-96. Review.

PMID:
9291092
10.

Nuclear non-coding RNAs are transcribed from the centromeres of Plasmodium falciparum and are associated with centromeric chromatin.

Li F, Sonbuchner L, Kyes SA, Epp C, Deitsch KW.

J Biol Chem. 2008 Feb 29;283(9):5692-8. doi: 10.1074/jbc.M707344200. Epub 2007 Dec 28.

11.

The eukaryotic genome: a system regulated at different hierarchical levels.

van Driel R, Fransz PF, Verschure PJ.

J Cell Sci. 2003 Oct 15;116(Pt 20):4067-75. Review.

12.

[Regulatory mechanisms of mammalian imprinting].

Patkin EL, Suchkova IO.

Tsitologiia. 2006;48(7):578-94. Review. Russian.

PMID:
17087149
13.

Linkages of nuclear architecture to biological and pathological control of gene expression.

Stein GS, van Wijnen AJ, Stein JL, Lian JB, Pockwinse SM, McNeil S.

J Cell Biochem Suppl. 1998;30-31:220-31. Review.

PMID:
9893274
14.

Quantitative signature for architectural organization of regulatory factors using intranuclear informatics.

Young DW, Zaidi SK, Furcinitti PS, Javed A, van Wijnen AJ, Stein JL, Lian JB, Stein GS.

J Cell Sci. 2004 Oct 1;117(Pt 21):4889-96. Epub 2004 Sep 14.

15.

Contributions of nuclear architecture to transcriptional control.

Stein GS, van Wijnen AJ, Stein J, Lian JB, Montecino M.

Int Rev Cytol. 1995;162A:251-78. Review.

PMID:
8575882
16.

The hierarchy of the 3D genome.

Gibcus JH, Dekker J.

Mol Cell. 2013 Mar 7;49(5):773-82. doi: 10.1016/j.molcel.2013.02.011. Review.

17.

Spatial proximity and similarity of the epigenetic state of genome domains.

Khrameeva EE, Mironov AA, Fedonin GG, Khaitovich P, Gelfand MS.

PLoS One. 2012;7(4):e33947. doi: 10.1371/journal.pone.0033947. Epub 2012 Apr 4.

18.

Nuclear architecture and gene regulation.

Fedorova E, Zink D.

Biochim Biophys Acta. 2008 Nov;1783(11):2174-84. doi: 10.1016/j.bbamcr.2008.07.018. Epub 2008 Jul 31. Review.

19.

Combinatorial organization of the transcriptional regulatory machinery in biological control and cancer.

Stein GS, Lian JB, Stein JL, van Wijnen AJ, Javed A, Montecino M, Zaidi SK, Young DW, Choi JY, Pratap J.

Adv Enzyme Regul. 2005;45:136-54. Epub 2005 Aug 30. Review.

PMID:
16135382
20.

Throwing transcription for a loop: expression of the genome in the 3D nucleus.

Hou C, Corces VG.

Chromosoma. 2012 Apr;121(2):107-16. doi: 10.1007/s00412-011-0352-7. Epub 2011 Nov 18. Review.

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