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Results: 1 to 20 of 117

1.

Hydrophilic material for the selective enrichment of 5-hydroxymethylcytosine and its liquid chromatography-tandem mass spectrometry detection.

Tang Y, Chu JM, Huang W, Xiong J, Xing XW, Zhou X, Feng YQ, Yuan BF.

Anal Chem. 2013 Jun 18;85(12):6129-35. doi: 10.1021/ac4010869. Epub 2013 May 28.

PMID:
23678980
[PubMed - indexed for MEDLINE]
2.

Quantification of 5-methylcytosine and 5-hydroxymethylcytosine in genomic DNA from hepatocellular carcinoma tissues by capillary hydrophilic-interaction liquid chromatography/quadrupole TOF mass spectrometry.

Chen ML, Shen F, Huang W, Qi JH, Wang Y, Feng YQ, Liu SM, Yuan BF.

Clin Chem. 2013 May;59(5):824-32. doi: 10.1373/clinchem.2012.193938. Epub 2013 Jan 23.

PMID:
23344498
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

High sensitivity 5-hydroxymethylcytosine detection in Balb/C brain tissue.

Davis T, Vaisvila R.

J Vis Exp. 2011 Feb 1;(48). pii: 2661. doi: 10.3791/2661.

PMID:
21307836
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Quantification of the sixth DNA base 5-hydroxymethylcytosine in colorectal cancer tissue and C-26 cell line.

Zhang LT, Zhang LJ, Zhang JJ, Ye XX, Xie AM, Chen LY, Kang JX, Cai C.

Bioanalysis. 2013 Apr;5(7):839-45. doi: 10.4155/bio.13.28.

PMID:
23534428
[PubMed - indexed for MEDLINE]
5.
6.

5-Hydroxymethylcytosine, the sixth base of the genome.

Münzel M, Globisch D, Carell T.

Angew Chem Int Ed Engl. 2011 Jul 11;50(29):6460-8. doi: 10.1002/anie.201101547. Epub 2011 Jun 17. Review.

PMID:
21688365
[PubMed - indexed for MEDLINE]
7.

Simultaneous determination of global DNA methylation and hydroxymethylation levels by hydrophilic interaction liquid chromatography-tandem mass spectrometry.

Zhang L, Zhang L, Zhou K, Ye X, Zhang J, Xie A, Chen L, Kang JX, Cai C.

J Biomol Screen. 2012 Aug;17(7):877-84. doi: 10.1177/1087057112447946. Epub 2012 May 29.

PMID:
22644266
[PubMed - indexed for MEDLINE]
8.

Bioorthogonal labeling of 5-hydroxymethylcytosine in genomic DNA and diazirine-based DNA photo-cross-linking probes.

Song CX, He C.

Acc Chem Res. 2011 Sep 20;44(9):709-17. doi: 10.1021/ar2000502. Epub 2011 May 3.

PMID:
21539303
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

A validated quantitative liquid chromatography-tandem quadrupole mass spectrometry method for monitoring isotopologues to evaluate global modified cytosine ratios in genomic DNA.

Tsuji M, Matsunaga H, Jinno D, Tsukamoto H, Suzuki N, Tomioka Y.

J Chromatogr B Analyt Technol Biomed Life Sci. 2014 Mar 15;953-954:38-47. doi: 10.1016/j.jchromb.2014.01.050. Epub 2014 Feb 7.

PMID:
24568937
[PubMed - indexed for MEDLINE]
10.

Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates.

Globisch D, Münzel M, Müller M, Michalakis S, Wagner M, Koch S, Brückl T, Biel M, Carell T.

PLoS One. 2010 Dec 23;5(12):e15367. doi: 10.1371/journal.pone.0015367.

PMID:
21203455
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine.

Song CX, Szulwach KE, Fu Y, Dai Q, Yi C, Li X, Li Y, Chen CH, Zhang W, Jian X, Wang J, Zhang L, Looney TJ, Zhang B, Godley LA, Hicks LM, Lahn BT, Jin P, He C.

Nat Biotechnol. 2011 Jan;29(1):68-72. doi: 10.1038/nbt.1732. Epub 2010 Dec 12.

PMID:
21151123
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

[Analysis of global deoxyribonucleic acid 5-hydroxymethylcytosine in tissue by liquid chromatography-tandem mass spectrometry].

Chen L, Zhang L, Zhang L, Cai C.

Se Pu. 2012 May;30(5):533-7. Chinese.

PMID:
22934419
[PubMed - indexed for MEDLINE]
13.

A sensitive mass spectrometry method for simultaneous quantification of DNA methylation and hydroxymethylation levels in biological samples.

Le T, Kim KP, Fan G, Faull KF.

Anal Biochem. 2011 May 15;412(2):203-9. doi: 10.1016/j.ab.2011.01.026. Epub 2011 Jan 24.

PMID:
21272560
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Low values of 5-hydroxymethylcytosine (5hmC), the "sixth base," are associated with anaplasia in human brain tumors.

Kraus TF, Globisch D, Wagner M, Eigenbrod S, Widmann D, Münzel M, Müller M, Pfaffeneder T, Hackner B, Feiden W, Schüller U, Carell T, Kretzschmar HA.

Int J Cancer. 2012 Oct 1;131(7):1577-90. doi: 10.1002/ijc.27429. Epub 2012 Mar 2.

PMID:
22234893
[PubMed - indexed for MEDLINE]
15.

Fluorescent strategy based on cationic conjugated polymer fluorescence resonance energy transfer for the quantification of 5-(hydroxymethyl)cytosine in genomic DNA.

Hong T, Wang T, Guo P, Xing X, Ding F, Chen Y, Wu J, Ma J, Wu F, Zhou X.

Anal Chem. 2013 Nov 19;85(22):10797-802. doi: 10.1021/ac4020676. Epub 2013 Oct 29.

PMID:
23991669
[PubMed - indexed for MEDLINE]
16.

Biochemical characterization of recombinant β-glucosyltransferase and analysis of global 5-hydroxymethylcytosine in unique genomes.

Terragni J, Bitinaite J, Zheng Y, Pradhan S.

Biochemistry. 2012 Feb 7;51(5):1009-19. doi: 10.1021/bi2014739. Epub 2012 Jan 27. Erratum in: Biochemistry. 2012 Aug 7;51(31):6261.

PMID:
22229759
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Selective capture of 5-hydroxymethylcytosine from genomic DNA.

Li Y, Song CX, He C, Jin P.

J Vis Exp. 2012 Oct 5;(68). pii: 4441. doi: 10.3791/4441.

PMID:
23070273
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Genome-wide hydroxymethylation tested using the HELP-GT assay shows redistribution in cancer.

Bhattacharyya S, Yu Y, Suzuki M, Campbell N, Mazdo J, Vasanthakumar A, Bhagat TD, Nischal S, Christopeit M, Parekh S, Steidl U, Godley L, Maitra A, Greally JM, Verma A.

Nucleic Acids Res. 2013 Sep;41(16):e157. doi: 10.1093/nar/gkt601. Epub 2013 Jul 16.

PMID:
23861445
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Lineage-specific distribution of high levels of genomic 5-hydroxymethylcytosine in mammalian development.

Ruzov A, Tsenkina Y, Serio A, Dudnakova T, Fletcher J, Bai Y, Chebotareva T, Pells S, Hannoun Z, Sullivan G, Chandran S, Hay DC, Bradley M, Wilmut I, De Sousa P.

Cell Res. 2011 Sep;21(9):1332-42. doi: 10.1038/cr.2011.113. Epub 2011 Jul 12.

PMID:
21747414
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Determination of oxidation products of 5-methylcytosine in plants by chemical derivatization coupled with liquid chromatography/tandem mass spectrometry analysis.

Tang Y, Xiong J, Jiang HP, Zheng SJ, Feng YQ, Yuan BF.

Anal Chem. 2014 Aug 5;86(15):7764-72. doi: 10.1021/ac5016886. Epub 2014 Jul 8.

PMID:
24970241
[PubMed - in process]
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