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Results: 1 to 20 of 119

Similar articles for PubMed (Select 23674132)

1.

Genome-wide SNP discovery in mungbean by Illumina HiSeq.

Van K, Kang YJ, Han KS, Lee YH, Gwag JG, Moon JK, Lee SH.

Theor Appl Genet. 2013 Aug;126(8):2017-27. doi: 10.1007/s00122-013-2114-9. Epub 2013 May 15.

PMID:
23674132
2.

Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms.

You FM, Deal KR, Wang J, Britton MT, Fass JN, Lin D, Dandekar AM, Leslie CA, Aradhya M, Luo MC, Dvorak J.

BMC Genomics. 2012 Jul 31;13:354. doi: 10.1186/1471-2164-13-354.

3.

Characterization of microsatellites and gene contents from genome shotgun sequences of mungbean (Vigna radiata (L.) Wilczek).

Tangphatsornruang S, Somta P, Uthaipaisanwong P, Chanprasert J, Sangsrakru D, Seehalak W, Sommanas W, Tragoonrung S, Srinives P.

BMC Plant Biol. 2009 Nov 24;9:137. doi: 10.1186/1471-2229-9-137.

4.

Molecular characterization of Vigna radiata (L.) Wilczek genotypes based on nuclear ribosomal DNA and RAPD polymorphism.

Raturi A, Singh SK, Sharma V, Pathak R.

Mol Biol Rep. 2012 Mar;39(3):2455-65. doi: 10.1007/s11033-011-0996-7. Epub 2011 Jun 11.

PMID:
21667105
5.

Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome.

Azam S, Thakur V, Ruperao P, Shah T, Balaji J, Amindala B, Farmer AD, Studholme DJ, May GD, Edwards D, Jones JD, Varshney RK.

Am J Bot. 2012 Feb;99(2):186-92. doi: 10.3732/ajb.1100419. Epub 2012 Feb 1.

6.

SNP discovery by illumina-based transcriptome sequencing of the olive and the genetic characterization of Turkish olive genotypes revealed by AFLP, SSR and SNP markers.

Kaya HB, Cetin O, Kaya H, Sahin M, Sefer F, Kahraman A, Tanyolac B.

PLoS One. 2013 Sep 13;8(9):e73674. doi: 10.1371/journal.pone.0073674. eCollection 2013.

7.

SNP discovery by high-throughput sequencing in soybean.

Wu X, Ren C, Joshi T, Vuong T, Xu D, Nguyen HT.

BMC Genomics. 2010 Aug 11;11:469. doi: 10.1186/1471-2164-11-469.

8.

Genomic DNA enrichment using sequence capture microarrays: a novel approach to discover sequence nucleotide polymorphisms (SNP) in Brassica napus L.

Clarke WE, Parkin IA, Gajardo HA, Gerhardt DJ, Higgins E, Sidebottom C, Sharpe AG, Snowdon RJ, Federico ML, Iniguez-Luy FL.

PLoS One. 2013 Dec 3;8(12):e81992. doi: 10.1371/journal.pone.0081992. eCollection 2013.

9.

Sequence information on simple sequence repeats and single nucleotide polymorphisms through transcriptome analysis of mungbean.

Moe KT, Chung JW, Cho YI, Moon JK, Ku JH, Jung JK, Lee J, Park YJ.

J Integr Plant Biol. 2011 Jan;53(1):63-73. doi: 10.1111/j.1744-7909.2010.01012.x.

PMID:
21205180
10.

De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes.

Ashrafi H, Hill T, Stoffel K, Kozik A, Yao J, Chin-Wo SR, Van Deynze A.

BMC Genomics. 2012 Oct 30;13:571. doi: 10.1186/1471-2164-13-571.

11.

SNP discovery with EST and NextGen sequencing in switchgrass (Panicum virgatum L.).

Ersoz ES, Wright MH, Pangilinan JL, Sheehan MJ, Tobias C, Casler MD, Buckler ES, Costich DE.

PLoS One. 2012;7(9):e44112. doi: 10.1371/journal.pone.0044112. Epub 2012 Sep 25.

12.

SNP discovery by transcriptome pyrosequencing.

Barbazuk WB, Schnable PS.

Methods Mol Biol. 2011;729:225-46. doi: 10.1007/978-1-61779-065-2_15.

PMID:
21365494
13.

Construction and application for QTL analysis of a Restriction Site Associated DNA (RAD) linkage map in barley.

Chutimanitsakun Y, Nipper RW, Cuesta-Marcos A, Cistué L, Corey A, Filichkina T, Johnson EA, Hayes PM.

BMC Genomics. 2011 Jan 4;12:4. doi: 10.1186/1471-2164-12-4.

14.

Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.).

Gujaria N, Kumar A, Dauthal P, Dubey A, Hiremath P, Bhanu Prakash A, Farmer A, Bhide M, Shah T, Gaur PM, Upadhyaya HD, Bhatia S, Cook DR, May GD, Varshney RK.

Theor Appl Genet. 2011 May;122(8):1577-89. doi: 10.1007/s00122-011-1556-1. Epub 2011 Mar 8.

15.

Discovery of high-confidence single nucleotide polymorphisms from large-scale de novo analysis of leaf transcripts of Aegilops tauschii, a wild wheat progenitor.

Iehisa JC, Shimizu A, Sato K, Nasuda S, Takumi S.

DNA Res. 2012 Dec;19(6):487-97. doi: 10.1093/dnares/dss028. Epub 2012 Nov 2.

16.

Construction of a genetic linkage map and genetic analysis of domestication related traits in mungbean (Vigna radiata).

Isemura T, Kaga A, Tabata S, Somta P, Srinives P, Shimizu T, Jo U, Vaughan DA, Tomooka N.

PLoS One. 2012;7(8):e41304. doi: 10.1371/journal.pone.0041304. Epub 2012 Aug 2.

17.

Early developmental and stress responsive ESTs from mungbean, Vigna radiata (L.) Wilczek, seedlings.

Chen LR, Markhart AH, Shanmugasundaram S, Lin TY.

Plant Cell Rep. 2008 Mar;27(3):535-52. Epub 2007 Dec 4.

PMID:
18060406
18.

A set of EST-SNPs for map saturation and cultivar identification in melon.

Deleu W, Esteras C, Roig C, González-To M, Fernández-Silva I, Gonzalez-Ibeas D, Blanca J, Aranda MA, Arús P, Nuez F, Monforte AJ, Picó MB, Garcia-Mas J.

BMC Plant Biol. 2009 Jul 15;9:90. doi: 10.1186/1471-2229-9-90.

19.

The development and characterization of a 60K SNP chip for chicken.

Groenen MA, Megens HJ, Zare Y, Warren WC, Hillier LW, Crooijmans RP, Vereijken A, Okimoto R, Muir WM, Cheng HH.

BMC Genomics. 2011 May 31;12(1):274. doi: 10.1186/1471-2164-12-274.

20.

A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs.

Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ.

Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18159-64. doi: 10.1073/pnas.0905886106. Epub 2009 Oct 13.

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