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Results: 1 to 20 of 72

1.

A robust rerank approach for feature selection and its application to pooling-based GWA studies.

Liu JR, Kuo PH, Hung H.

Comput Math Methods Med. 2013;2013:860673. doi: 10.1155/2013/860673. Epub 2013 Apr 4.

PMID:
23653667
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data.

Jeffery IB, Higgins DG, Culhane AC.

BMC Bioinformatics. 2006 Jul 26;7:359.

PMID:
16872483
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Mixture model for sub-phenotyping in GWAS.

Warde-Farley D, Brudno M, Morris Q, Goldenberg A.

Pac Symp Biocomput. 2012:363-74.

PMID:
22174291
[PubMed - indexed for MEDLINE]
Free Article
4.

Rank-based robust tests for quantitative-trait genetic association studies.

Li Q, Li Z, Zheng G, Gao G, Yu K.

Genet Epidemiol. 2013 May;37(4):358-65. doi: 10.1002/gepi.21723. Epub 2013 Mar 21.

PMID:
23526350
[PubMed - indexed for MEDLINE]
5.

An application of Random Forests to a genome-wide association dataset: methodological considerations & new findings.

Goldstein BA, Hubbard AE, Cutler A, Barcellos LF.

BMC Genet. 2010 Jun 14;11:49. doi: 10.1186/1471-2156-11-49.

PMID:
20546594
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A robust genome-wide scan statistic of the Wellcome Trust Case-Control Consortium.

Joo J, Kwak M, Ahn K, Zheng G.

Biometrics. 2009 Dec;65(4):1115-22. doi: 10.1111/j.1541-0420.2009.01185.x. Epub .

PMID:
19432787
[PubMed - indexed for MEDLINE]
7.

SNP selection and classification of genome-wide SNP data using stratified sampling random forests.

Wu Q, Ye Y, Liu Y, Ng MK.

IEEE Trans Nanobioscience. 2012 Sep;11(3):216-27. doi: 10.1109/TNB.2012.2214232.

PMID:
22987127
[PubMed - indexed for MEDLINE]
8.

Bagging optimal ROC curve method for predictive genetic tests, with an application for rheumatoid arthritis.

Lu Q, Cui Y, Ye C, Wei C, Elston RC.

J Biopharm Stat. 2010 Mar;20(2):401-14. doi: 10.1080/10543400903572811.

PMID:
20309765
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genetic studies of complex human diseases: characterizing SNP-disease associations using Bayesian networks.

Han B, Chen XW, Talebizadeh Z, Xu H.

BMC Syst Biol. 2012;6 Suppl 3:S14. doi: 10.1186/1752-0509-6-S3-S14. Epub 2012 Dec 17.

PMID:
23281790
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Meta-analysis of heterogeneous data sources for genome-scale identification of risk genes in complex phenotypes.

Pers TH, Hansen NT, Lage K, Koefoed P, Dworzynski P, Miller ML, Flint TJ, Mellerup E, Dam H, Andreassen OA, Djurovic S, Melle I, Børglum AD, Werge T, Purcell S, Ferreira MA, Kouskoumvekaki I, Workman CT, Hansen T, Mors O, Brunak S.

Genet Epidemiol. 2011 Jul;35(5):318-32. doi: 10.1002/gepi.20580. Epub 2011 Apr 11.

PMID:
21484861
[PubMed - indexed for MEDLINE]
11.

Incorporating group correlations in genome-wide association studies using smoothed group Lasso.

Liu J, Huang J, Ma S, Wang K.

Biostatistics. 2013 Apr;14(2):205-19. doi: 10.1093/biostatistics/kxs034. Epub 2012 Sep 17.

PMID:
22988281
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

MAX-rank: a simple and robust genome-wide scan for case-control association studies.

Li Q, Yu K, Li Z, Zheng G.

Hum Genet. 2008 Jul;123(6):617-23. doi: 10.1007/s00439-008-0514-8. Epub 2008 May 20.

PMID:
18491142
[PubMed - indexed for MEDLINE]
13.

Gene ontology analysis of GWA study data sets provides insights into the biology of bipolar disorder.

Holmans P, Green EK, Pahwa JS, Ferreira MA, Purcell SM, Sklar P; Wellcome Trust Case-Control Consortium, Owen MJ, O'Donovan MC, Craddock N.

Am J Hum Genet. 2009 Jul;85(1):13-24. doi: 10.1016/j.ajhg.2009.05.011. Epub 2009 Jun 18.

PMID:
19539887
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

GWIS--model-free, fast and exhaustive search for epistatic interactions in case-control GWAS.

Goudey B, Rawlinson D, Wang Q, Shi F, Ferra H, Campbell RM, Stern L, Inouye MT, Ong CS, Kowalczyk A.

BMC Genomics. 2013;14 Suppl 3:S10. doi: 10.1186/1471-2164-14-S3-S10. Epub 2013 May 28.

PMID:
23819779
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Shrinkage estimation for robust and efficient screening of single-SNP association from case-control genome-wide association studies.

Luo S, Mukherjee B, Chen J, Chatterjee N.

Genet Epidemiol. 2009 Dec;33(8):740-50. doi: 10.1002/gepi.20428.

PMID:
19434716
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Finite adaptation and multistep moves in the metropolis-hastings algorithm for variable selection in genome-wide association analysis.

Peltola T, Marttinen P, Vehtari A.

PLoS One. 2012;7(11):e49445. doi: 10.1371/journal.pone.0049445. Epub 2012 Nov 15.

PMID:
23166669
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Data mining approaches for genome-wide association of mood disorders.

Pirooznia M, Seifuddin F, Judy J, Mahon PB; Bipolar Genome Study (BiGS) Consortium, Potash JB, Zandi PP.

Psychiatr Genet. 2012 Apr;22(2):55-61. doi: 10.1097/YPG.0b013e32834dc40d.

PMID:
22081063
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Phenotype prediction from genome-wide association studies: application to smoking behaviors.

Yoon D, Kim YJ, Park T.

BMC Syst Biol. 2012;6 Suppl 2:S11. doi: 10.1186/1752-0509-6-S2-S11. Epub 2012 Dec 12.

PMID:
23281841
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

A generalized Kruskal-Wallis test incorporating group uncertainty with application to genetic association studies.

Acar EF, Sun L.

Biometrics. 2013 Jun;69(2):427-35. doi: 10.1111/biom.12006. Epub 2013 Feb 26.

PMID:
23441822
[PubMed - indexed for MEDLINE]
20.

From disease association to risk assessment: an optimistic view from genome-wide association studies on type 1 diabetes.

Wei Z, Wang K, Qu HQ, Zhang H, Bradfield J, Kim C, Frackleton E, Hou C, Glessner JT, Chiavacci R, Stanley C, Monos D, Grant SF, Polychronakos C, Hakonarson H.

PLoS Genet. 2009 Oct;5(10):e1000678. doi: 10.1371/journal.pgen.1000678. Epub 2009 Oct 9.

PMID:
19816555
[PubMed - indexed for MEDLINE]
Free PMC Article
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