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Results: 1 to 20 of 115

Similar articles for PubMed (Select 23650633)

1.

Functional anatomy of distant-acting mammalian enhancers.

Dickel DE, Visel A, Pennacchio LA.

Philos Trans R Soc Lond B Biol Sci. 2013 May 6;368(1620):20120359. doi: 10.1098/rstb.2012.0359. Print 2013. Review.

2.

Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation.

Zabidi MA, Arnold CD, Schernhuber K, Pagani M, Rath M, Frank O, Stark A.

Nature. 2015 Feb 26;518(7540):556-9. doi: 10.1038/nature13994. Epub 2014 Dec 15.

PMID:
25517091
3.

Conserved and non-conserved enhancers direct tissue specific transcription in ancient germ layer specific developmental control genes.

Chatterjee S, Bourque G, Lufkin T.

BMC Dev Biol. 2011 Oct 20;11:63. doi: 10.1186/1471-213X-11-63.

4.

Functional analysis of limb transcriptional enhancers in the mouse.

Nolte MJ, Wang Y, Deng JM, Swinton PG, Wei C, Guindani M, Schwartz RJ, Behringer RR.

Evol Dev. 2014 Jul-Aug;16(4):207-23. doi: 10.1111/ede.12084. Epub 2014 Jun 11.

PMID:
24920384
5.

Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization.

Menoret D, Santolini M, Fernandes I, Spokony R, Zanet J, Gonzalez I, Latapie Y, Ferrer P, Rouault H, White KP, Besse P, Hakim V, Aerts S, Payre F, Plaza S.

Genome Biol. 2013 Aug 23;14(8):R86. doi: 10.1186/gb-2013-14-8-r86.

6.

Neural precursor-specific expression of multiple Drosophila genes is driven by dual enhancer modules with overlapping function.

Miller SW, Rebeiz M, Atanasov JE, Posakony JW.

Proc Natl Acad Sci U S A. 2014 Dec 2;111(48):17194-9. doi: 10.1073/pnas.1415308111. Epub 2014 Nov 17.

7.

Integration of genomic and functional approaches reveals enhancers at LMX1A and LMX1B.

Burzynski GM, Reed X, Maragh S, Matsui T, McCallion AS.

Mol Genet Genomics. 2013 Nov;288(11):579-89. doi: 10.1007/s00438-013-0771-7. Epub 2013 Aug 13.

8.

ChIP-seq accurately predicts tissue-specific activity of enhancers.

Visel A, Blow MJ, Li Z, Zhang T, Akiyama JA, Holt A, Plajzer-Frick I, Shoukry M, Wright C, Chen F, Afzal V, Ren B, Rubin EM, Pennacchio LA.

Nature. 2009 Feb 12;457(7231):854-8. doi: 10.1038/nature07730.

9.

The selection and function of cell type-specific enhancers.

Heinz S, Romanoski CE, Benner C, Glass CK.

Nat Rev Mol Cell Biol. 2015 Mar;16(3):144-54. doi: 10.1038/nrm3949. Epub 2015 Feb 4. Review.

PMID:
25650801
10.

An IgH enhancer that drives transcription through basic helix-loop-helix and Oct transcription factor binding motifs. Functional analysis of the E(mu)3' enhancer of the catfish.

Cioffi CC, Middleton DL, Wilson MR, Miller NW, Clem LW, Warr GW.

J Biol Chem. 2001 Jul 27;276(30):27825-30. Epub 2001 May 25.

11.

Genome organization and long-range regulation of gene expression by enhancers.

Smallwood A, Ren B.

Curr Opin Cell Biol. 2013 Jun;25(3):387-94. doi: 10.1016/j.ceb.2013.02.005. Epub 2013 Mar 4. Review.

12.

A distal modular enhancer complex acts to control pituitary- and nervous system-specific expression of the LHX3 regulatory gene.

Mullen RD, Park S, Rhodes SJ.

Mol Endocrinol. 2012 Feb;26(2):308-19. doi: 10.1210/me.2011-1252. Epub 2011 Dec 22.

13.

Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb.

Cotney J, Leng J, Oh S, DeMare LE, Reilly SK, Gerstein MB, Noonan JP.

Genome Res. 2012 Jun;22(6):1069-80. doi: 10.1101/gr.129817.111. Epub 2012 Mar 15.

14.

Genomic views of distant-acting enhancers.

Visel A, Rubin EM, Pennacchio LA.

Nature. 2009 Sep 10;461(7261):199-205. doi: 10.1038/nature08451. Review.

15.

Chondrocyte-specific enhancer elements in the Col11a2 gene resemble the Col2a1 tissue-specific enhancer.

Bridgewater LC, Lefebvre V, de Crombrugghe B.

J Biol Chem. 1998 Jun 12;273(24):14998-5006.

16.

VISTA Enhancer Browser--a database of tissue-specific human enhancers.

Visel A, Minovitsky S, Dubchak I, Pennacchio LA.

Nucleic Acids Res. 2007 Jan;35(Database issue):D88-92. Epub 2006 Nov 27.

17.

Computational identification of active enhancers in model organisms.

Wang C, Zhang MQ, Zhang Z.

Genomics Proteomics Bioinformatics. 2013 Jun;11(3):142-50. doi: 10.1016/j.gpb.2013.04.002. Epub 2013 May 17. Review.

18.

Transcriptional enhancers: from properties to genome-wide predictions.

Shlyueva D, Stampfel G, Stark A.

Nat Rev Genet. 2014 Apr;15(4):272-86. doi: 10.1038/nrg3682. Epub 2014 Mar 11. Review.

PMID:
24614317
19.

A machine learning approach for identifying novel cell type-specific transcriptional regulators of myogenesis.

Busser BW, Taher L, Kim Y, Tansey T, Bloom MJ, Ovcharenko I, Michelson AM.

PLoS Genet. 2012;8(3):e1002531. doi: 10.1371/journal.pgen.1002531. Epub 2012 Mar 8.

20.
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