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Results: 1 to 20 of 71

1.

Enrichment strategies in glycomics-based lung cancer biomarker development.

Ruhaak LR, Nguyen UT, Stroble C, Taylor SL, Taguchi A, Hanash SM, Lebrilla CB, Kim K, Miyamoto S.

Proteomics Clin Appl. 2013 May 3. doi: 10.1002/prca.201200131. [Epub ahead of print]

PMID:
23640812
[PubMed - as supplied by publisher]
2.

A glycomics approach to the discovery of potential cancer biomarkers.

An HJ, Lebrilla CB.

Methods Mol Biol. 2010;600:199-213. doi: 10.1007/978-1-60761-454-8_14.

PMID:
19882130
[PubMed - indexed for MEDLINE]
3.

Evaluation of glycomic profiling as a diagnostic biomarker for epithelial ovarian cancer.

Kim K, Ruhaak LR, Nguyen UT, Taylor SL, Dimapasoc L, Williams C, Stroble C, Ozcan S, Miyamoto S, Lebrilla CB, Leiserowitz GS.

Cancer Epidemiol Biomarkers Prev. 2014 Apr;23(4):611-21. doi: 10.1158/1055-9965.EPI-13-1073. Epub 2014 Feb 20.

PMID:
24557531
[PubMed - in process]
4.

Development of a Chip/Chip/SRM platform using digital chip isoelectric focusing and LC-Chip mass spectrometry for enrichment and quantitation of low abundance protein biomarkers in human plasma.

Rafalko A, Dai S, Hancock WS, Karger BL, Hincapie M.

J Proteome Res. 2012 Feb 3;11(2):808-17. doi: 10.1021/pr2006704. Epub 2011 Dec 27.

PMID:
22098410
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Hexapeptide library as a universal tool for sample preparation in protein glycosylation analysis.

Huhn C, Ruhaak LR, Wuhrer M, Deelder AM.

J Proteomics. 2012 Feb 16;75(5):1515-28. doi: 10.1016/j.jprot.2011.11.028. Epub 2011 Dec 2.

PMID:
22154983
[PubMed - indexed for MEDLINE]
6.

Multiplexed surrogate analysis of glycotransferase activity in whole biospecimens.

Borges CR, Rehder DS, Boffetta P.

Anal Chem. 2013 Mar 5;85(5):2927-36. doi: 10.1021/ac3035579. Epub 2013 Feb 15.

PMID:
23368525
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

A lectin HPLC method to enrich selectively-glycosylated peptides from complex biological samples.

Johansen E, Schilling B, Lerch M, Niles RK, Liu H, Li B, Allen S, Hall SC, Witkowska HE, Regnier FE, Gibson BW, Fisher SJ, Drake PM.

J Vis Exp. 2009 Oct 1;(32). pii: 1398. doi: 10.3791/1398.

PMID:
19798022
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

On the analysis of glycomics mass spectrometry data via the regularized area under the ROC curve.

Ye J, Liu H, Kirmiz C, Lebrilla CB, Rocke DM.

BMC Bioinformatics. 2007 Dec 12;8:477.

PMID:
18076765
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Novel data analysis tool for semiquantitative LC-MS-MS2 profiling of N-glycans.

Peltoniemi H, Natunen S, Ritamo I, Valmu L, Räbinä J.

Glycoconj J. 2013 Feb;30(2):159-70. doi: 10.1007/s10719-012-9412-3. Epub 2012 Jun 17.

PMID:
22707226
[PubMed - indexed for MEDLINE]
10.

Elucidation of N-glycosites within human plasma glycoproteins for cancer biomarker discovery.

Drake P, Schilling B, Gibson B, Fisher S.

Methods Mol Biol. 2013;951:307-22. doi: 10.1007/978-1-62703-146-2_21.

PMID:
23296540
[PubMed - indexed for MEDLINE]
11.

Isomer-specific chromatographic profiling yields highly sensitive and specific potential N-glycan biomarkers for epithelial ovarian cancer.

Hua S, Williams CC, Dimapasoc LM, Ro GS, Ozcan S, Miyamoto S, Lebrilla CB, An HJ, Leiserowitz GS.

J Chromatogr A. 2013 Mar 1;1279:58-67. doi: 10.1016/j.chroma.2012.12.079. Epub 2013 Jan 11.

PMID:
23380366
[PubMed - indexed for MEDLINE]
12.

Examination of glycan profiles from IgG-depleted human immunoglobulins facilitated by microscale affinity chromatography.

Svoboda M, Mann BF, Goetz JA, Novotny MV.

Anal Chem. 2012 Apr 3;84(7):3269-77. doi: 10.1021/ac203336u. Epub 2012 Mar 13.

PMID:
22360417
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Differentiation of cancer cell origin and molecular subtype by plasma membrane N-glycan profiling.

Hua S, Saunders M, Dimapasoc LM, Jeong SH, Kim BJ, Kim S, So M, Lee KS, Kim JH, Lam KS, Lebrilla CB, An HJ.

J Proteome Res. 2014 Feb 7;13(2):961-8. doi: 10.1021/pr400987f. Epub 2014 Jan 8.

PMID:
24303873
[PubMed - in process]
14.

[Application of laser capture microdissection and surface-enhanced laser desorption ionization time-of-flight mass spectrometry to screen biomarkers for early diagnosis of lung adenocarcinoma].

Tian YX, Yang SY, Nan YD, Zhang W, Yu JK, Zheng S.

Sichuan Da Xue Xue Bao Yi Xue Ban. 2009 Jan;40(1):157-61. Chinese.

PMID:
19292069
[PubMed - indexed for MEDLINE]
15.

The glycolyzer: automated glycan annotation software for high performance mass spectrometry and its application to ovarian cancer glycan biomarker discovery.

Kronewitter SR, De Leoz ML, Strum JS, An HJ, Dimapasoc LM, Guerrero A, Miyamoto S, Lebrilla CB, Leiserowitz GS.

Proteomics. 2012 Aug;12(15-16):2523-38. doi: 10.1002/pmic.201100273.

PMID:
22903841
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Breast cancer diagnosis and prognosis through quantitative measurements of serum glycan profiles.

Kyselova Z, Mechref Y, Kang P, Goetz JA, Dobrolecki LE, Sledge GW, Schnaper L, Hickey RJ, Malkas LH, Novotny MV.

Clin Chem. 2008 Jul;54(7):1166-75. doi: 10.1373/clinchem.2007.087148. Epub 2008 May 16.

PMID:
18487288
[PubMed - indexed for MEDLINE]
Free Article
17.

The effects of abundant plasma protein depletion on global glycan profiling using nanoLC FT-ICR mass spectrometry.

Bereman MS, Muddiman DC.

Anal Bioanal Chem. 2010 Feb;396(4):1473-9. doi: 10.1007/s00216-009-3368-6. Epub 2010 Jan 20.

PMID:
20087731
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Different immunoaffinity fractionation strategies to characterize the human plasma proteome.

Gong Y, Li X, Yang B, Ying W, Li D, Zhang Y, Dai S, Cai Y, Wang J, He F, Qian X.

J Proteome Res. 2006 Jun;5(6):1379-87.

PMID:
16739989
[PubMed - indexed for MEDLINE]
19.

A serum glycomics approach to breast cancer biomarkers.

Kirmiz C, Li B, An HJ, Clowers BH, Chew HK, Lam KS, Ferrige A, Alecio R, Borowsky AD, Sulaimon S, Lebrilla CB, Miyamoto S.

Mol Cell Proteomics. 2007 Jan;6(1):43-55. Epub 2006 Jul 17.

PMID:
16847285
[PubMed - indexed for MEDLINE]
Free Article
20.

Development of serum glycoproteomic profiling technique; simultaneous identification of glycosylation sites and site-specific quantification of glycan structure changes.

Ueda K, Takami S, Saichi N, Daigo Y, Ishikawa N, Kohno N, Katsumata M, Yamane A, Ota M, Sato TA, Nakamura Y, Nakagawa H.

Mol Cell Proteomics. 2010 Sep;9(9):1819-28. doi: 10.1074/mcp.2010/000893.

PMID:
20811073
[PubMed - indexed for MEDLINE]
Free PMC Article

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