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Items: 1 to 20 of 103

1.

Off-target effect of endogenous siRNA derived from RMRP in human cells.

Maida Y, Kyo S, Lassmann T, Hayashizaki Y, Masutomi K.

Int J Mol Sci. 2013 Apr 29;14(5):9305-18. doi: 10.3390/ijms14059305.

2.

Molecular mechanisms of RNA-triggered gene silencing machineries.

Li Z, Rana TM.

Acc Chem Res. 2012 Jul 17;45(7):1122-31. doi: 10.1021/ar200253u. Epub 2012 Feb 3.

3.

Contribution of natural antisense transcription to an endogenous siRNA signature in human cells.

Werner A, Cockell S, Falconer J, Carlile M, Alnumeir S, Robinson J.

BMC Genomics. 2014 Jan 13;15:19. doi: 10.1186/1471-2164-15-19.

4.

Noncanonical microRNAs and endogenous siRNAs in normal and psoriatic human skin.

Xia J, Joyce CE, Bowcock AM, Zhang W.

Hum Mol Genet. 2013 Feb 15;22(4):737-48. doi: 10.1093/hmg/dds481. Epub 2012 Nov 21.

5.

Noncanonical microRNAs and endogenous siRNAs in lytic infection of murine gammaherpesvirus.

Xia J, Zhang W.

PLoS One. 2012;7(10):e47863. doi: 10.1371/journal.pone.0047863. Epub 2012 Oct 26.

6.

Modified siRNA structure with a single nucleotide bulge overcomes conventional siRNA-mediated off-target silencing.

Dua P, Yoo JW, Kim S, Lee DK.

Mol Ther. 2011 Sep;19(9):1676-87. doi: 10.1038/mt.2011.109. Epub 2011 Jun 14.

7.

Identification and characterization of microRNAs and endogenous siRNAs in Schistosoma japonicum.

Hao L, Cai P, Jiang N, Wang H, Chen Q.

BMC Genomics. 2010 Jan 21;11:55. doi: 10.1186/1471-2164-11-55.

8.

Roles of target site location and sequence complementarity in trans-acting siRNA formation in Arabidopsis.

Zhang C, Ng DW, Lu J, Chen ZJ.

Plant J. 2012 Jan;69(2):217-26. doi: 10.1111/j.1365-313X.2011.04783.x. Epub 2011 Oct 25.

9.

Selective silencing of gene target expression by siRNA expression plasmids in human cervical cancer cells.

Peralta-Zaragoza O, De-la-O-Gómez F, Deas J, Fernández-Tilapa G, Fierros-Zárate Gdel S, Gómez-Cerón C, Burguete-García A, Torres-Poveda K, Bermúdez-Morales VH, Rodríguez-Dorantes M, Pérez-Plasencia C, Madrid-Marina V.

Methods Mol Biol. 2015;1249:153-71. doi: 10.1007/978-1-4939-2013-6_11.

PMID:
25348304
10.

Small RNAs derived from lncRNA RNase MRP have gene-silencing activity relevant to human cartilage-hair hypoplasia.

Rogler LE, Kosmyna B, Moskowitz D, Bebawee R, Rahimzadeh J, Kutchko K, Laederach A, Notarangelo LD, Giliani S, Bouhassira E, Frenette P, Roy-Chowdhury J, Rogler CE.

Hum Mol Genet. 2014 Jan 15;23(2):368-82. doi: 10.1093/hmg/ddt427. Epub 2013 Sep 5.

11.

Specific inhibition of diverse pathogens in human cells by synthetic microRNA-like oligonucleotides inferred from RNAi screens.

Franceschini A, Meier R, Casanova A, Kreibich S, Daga N, Andritschke D, Dilling S, Rämö P, Emmenlauer M, Kaufmann A, Conde-Álvarez R, Low SH, Pelkmans L, Helenius A, Hardt WD, Dehio C, von Mering C.

Proc Natl Acad Sci U S A. 2014 Mar 25;111(12):4548-53. doi: 10.1073/pnas.1402353111. Epub 2014 Mar 10.

12.

In silico identification of novel endo-siRNAs.

Schuster A, Hennig GW, Ortogero N, Luong D, Yan W.

Methods Mol Biol. 2015;1218:341-51. doi: 10.1007/978-1-4939-1538-5_21.

PMID:
25319662
13.

MicroRNA-like off-target transcript regulation by siRNAs is species specific.

Burchard J, Jackson AL, Malkov V, Needham RH, Tan Y, Bartz SR, Dai H, Sachs AB, Linsley PS.

RNA. 2009 Feb;15(2):308-15. doi: 10.1261/rna.1326809.

14.

RNA interference: the molecular immune system.

Bagasra O, Prilliman KR.

J Mol Histol. 2004 Aug;35(6):545-53. Review.

PMID:
15614608
15.

An RNA-dependent RNA polymerase formed by TERT and the RMRP RNA.

Maida Y, Yasukawa M, Furuuchi M, Lassmann T, Possemato R, Okamoto N, Kasim V, Hayashizaki Y, Hahn WC, Masutomi K.

Nature. 2009 Sep 10;461(7261):230-5. doi: 10.1038/nature08283. Epub 2009 Aug 23.

16.

Single base mismatches in the mRNA target site allow specific seed region-mediated off-target binding of siRNA targeting human coagulation factor 7.

Ravon M, Berrera M, Ebeling M, Certa U.

RNA Biol. 2012 Jan;9(1):87-97. doi: 10.4161/rna.9.1.18121. Epub 2012 Jan 1.

17.

Analysis of putative miRNA binding sites and mRNA 3' ends as targets for siRNA-mediated gene knockdown.

Bergauer T, Krueger U, Lader E, Pilk S, Wolter I, Bielke W.

Oligonucleotides. 2009 Mar;19(1):41-52. doi: 10.1089/oli.2008.0154.

PMID:
19196098
18.

siRNAs can function as miRNAs.

Doench JG, Petersen CP, Sharp PA.

Genes Dev. 2003 Feb 15;17(4):438-42.

19.

Determinants of targeting by endogenous and exogenous microRNAs and siRNAs.

Nielsen CB, Shomron N, Sandberg R, Hornstein E, Kitzman J, Burge CB.

RNA. 2007 Nov;13(11):1894-910. Epub 2007 Sep 13.

20.

The siRNA Non-seed Region and Its Target Sequences Are Auxiliary Determinants of Off-Target Effects.

Kamola PJ, Nakano Y, Takahashi T, Wilson PA, Ui-Tei K.

PLoS Comput Biol. 2015 Dec 11;11(12):e1004656. doi: 10.1371/journal.pcbi.1004656. eCollection 2015 Dec.

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