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Items: 1 to 20 of 175

1.

Practical use of chemical shift databases for protein solid-state NMR: 2D chemical shift maps and amino-acid assignment with secondary-structure information.

Fritzsching KJ, Yang Y, Schmidt-Rohr K, Hong M.

J Biomol NMR. 2013 Jun;56(2):155-67. doi: 10.1007/s10858-013-9732-z. Epub 2013 Apr 28.

2.

Automated amino acid side-chain NMR assignment of proteins using (13)C- and (15)N-resolved 3D [ (1)H, (1)H]-NOESY.

Fiorito F, Herrmann T, Damberger FF, Wüthrich K.

J Biomol NMR. 2008 Sep;42(1):23-33. doi: 10.1007/s10858-008-9259-x. Epub 2008 Aug 16.

PMID:
18709333
3.

Nearest-neighbor effects on backbone alpha and beta carbon chemical shifts in proteins.

Wang L, Eghbalnia HR, Markley JL.

J Biomol NMR. 2007 Nov;39(3):247-57.

PMID:
17899393
4.

Secondary structural analysis of proteins based on (13)C chemical shift assignments in unresolved solid-state NMR spectra enhanced by fragmented structure database.

Ikeda K, Egawa A, Fujiwara T.

J Biomol NMR. 2013 Feb;55(2):189-200. doi: 10.1007/s10858-012-9701-y. Epub 2012 Dec 29.

PMID:
23271376
5.

Uncovering symmetry-breaking vector and reliability order for assigning secondary structures of proteins from atomic NMR chemical shifts in amino acids.

Yu W, Lee W, Lee W, Kim S, Chang I.

J Biomol NMR. 2011 Dec;51(4):411-24. doi: 10.1007/s10858-011-9579-0. Epub 2011 Oct 30.

PMID:
22038647
6.

CSSI-PRO: a method for secondary structure type editing, assignment and estimation in proteins using linear combination of backbone chemical shifts.

Swain M, Atreya HS.

J Biomol NMR. 2009 Aug;44(4):185-94. doi: 10.1007/s10858-009-9327-x. Epub 2009 Jun 16.

PMID:
19529884
7.
9.
10.

Assigning large proteins in the solid state: a MAS NMR resonance assignment strategy using selectively and extensively 13C-labelled proteins.

Higman VA, Flinders J, Hiller M, Jehle S, Markovic S, Fiedler S, van Rossum BJ, Oschkinat H.

J Biomol NMR. 2009 Aug;44(4):245-60. doi: 10.1007/s10858-009-9338-7. Epub 2009 Jul 17.

PMID:
19609683
11.

Partial site-specific assignment of a uniformly (13)C, (15)N enriched membrane protein, light-harvesting complex 1 (LH1), by solid state NMR.

Huang L, McDermott AE.

Biochim Biophys Acta. 2008 Sep;1777(9):1098-108. doi: 10.1016/j.bbabio.2008.01.006. Epub 2008 Jan 26.

12.

VITAL NMR: using chemical shift derived secondary structure information for a limited set of amino acids to assess homology model accuracy.

Brothers MC, Nesbitt AE, Hallock MJ, Rupasinghe SG, Tang M, Harris J, Baudry J, Schuler MA, Rienstra CM.

J Biomol NMR. 2012 Jan;52(1):41-56. doi: 10.1007/s10858-011-9576-3. Epub 2011 Nov 3.

PMID:
22183804
13.

Prediction algorithm for amino acid types with their secondary structure in proteins (PLATON) using chemical shifts.

Labudde D, Leitner D, Krüger M, Oschkinat H.

J Biomol NMR. 2003 Jan;25(1):41-53.

PMID:
12566998
14.

Reliability of exclusively NOESY-based automated resonance assignment and structure determination of proteins.

Schmidt E, Güntert P.

J Biomol NMR. 2013 Oct;57(2):193-204. doi: 10.1007/s10858-013-9779-x. Epub 2013 Sep 15.

PMID:
24036635
15.

Global fold of human cannabinoid type 2 receptor probed by solid-state 13C-, 15N-MAS NMR and molecular dynamics simulations.

Kimura T, Vukoti K, Lynch DL, Hurst DP, Grossfield A, Pitman MC, Reggio PH, Yeliseev AA, Gawrisch K.

Proteins. 2014 Mar;82(3):452-65. doi: 10.1002/prot.24411. Epub 2013 Oct 17.

16.

On the problem of resonance assignments in solid state NMR of uniformly ¹⁵N,¹³C-labeled proteins.

Tycko R.

J Magn Reson. 2015 Apr;253:166-72. doi: 10.1016/j.jmr.2015.02.006.

17.
18.

Using neural network predicted secondary structure information in automatic protein NMR assignment.

Choy WY, Sanctuary BC, Zhu G.

J Chem Inf Comput Sci. 1997 Nov-Dec;37(6):1086-94.

PMID:
9392858
19.

Amino acid selective unlabeling for sequence specific resonance assignments in proteins.

Krishnarjuna B, Jaipuria G, Thakur A, D'Silva P, Atreya HS.

J Biomol NMR. 2011 Jan;49(1):39-51. doi: 10.1007/s10858-010-9459-z. Epub 2010 Dec 9.

20.

CSI 2.0: a significantly improved version of the Chemical Shift Index.

Hafsa NE, Wishart DS.

J Biomol NMR. 2014 Nov;60(2-3):131-46. doi: 10.1007/s10858-014-9863-x. Epub 2014 Oct 2.

PMID:
25273503
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