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Items: 1 to 20 of 125

1.

Marked variability in the extent of protein disorder within and between viral families.

Pushker R, Mooney C, Davey NE, Jacqué JM, Shields DC.

PLoS One. 2013 Apr 19;8(4):e60724. doi: 10.1371/journal.pone.0060724. Print 2013.

2.

Orderly order in protein intrinsic disorder distribution: disorder in 3500 proteomes from viruses and the three domains of life.

Xue B, Dunker AK, Uversky VN.

J Biomol Struct Dyn. 2012;30(2):137-49. doi: 10.1080/07391102.2012.675145.

PMID:
22702725
3.

Viral disorder or disordered viruses: do viral proteins possess unique features?

Xue B, Williams RW, Oldfield CJ, Goh GK, Dunker AK, Uversky VN.

Protein Pept Lett. 2010 Aug;17(8):932-51. Review.

PMID:
20450483
4.

Viral proteomics.

Maxwell KL, Frappier L.

Microbiol Mol Biol Rev. 2007 Jun;71(2):398-411. Review. Erratum in: Microbiol Mol Biol Rev. 2007 Sep;71(3):549.

5.

The unfoldomics decade: an update on intrinsically disordered proteins.

Dunker AK, Oldfield CJ, Meng J, Romero P, Yang JY, Chen JW, Vacic V, Obradovic Z, Uversky VN.

BMC Genomics. 2008 Sep 16;9 Suppl 2:S1. doi: 10.1186/1471-2164-9-S2-S1.

6.

Viral proteins acquired from a host converge to simplified domain architectures.

Rappoport N, Linial M.

PLoS Comput Biol. 2012 Feb;8(2):e1002364. doi: 10.1371/journal.pcbi.1002364. Epub 2012 Feb 2.

7.

Mechanism of genome transcription in segmented dsRNA viruses.

Lawton JA, Estes MK, Prasad BV.

Adv Virus Res. 2000;55:185-229. Review.

PMID:
11050943
8.

Distinctive features of large complex virus genomes and proteomes.

Mrázek J, Karlin S.

Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):5127-32. Epub 2007 Mar 9.

9.

Conservation of intrinsic disorder in protein domains and families: II. functions of conserved disorder.

Chen JW, Romero P, Uversky VN, Dunker AK.

J Proteome Res. 2006 Apr;5(4):888-98.

10.

Use of host-like peptide motifs in viral proteins is a prevalent strategy in host-virus interactions.

Hagai T, Azia A, Babu MM, Andino R.

Cell Rep. 2014 Jun 12;7(5):1729-39. doi: 10.1016/j.celrep.2014.04.052. Epub 2014 May 29.

11.

Diversity and evolution of chromatin proteins encoded by DNA viruses.

de Souza RF, Iyer LM, Aravind L.

Biochim Biophys Acta. 2010 Mar-Apr;1799(3-4):302-18. doi: 10.1016/j.bbagrm.2009.10.006. Epub 2009 Oct 28. Review.

12.

Patterns of evolution and host gene mimicry in influenza and other RNA viruses.

Greenbaum BD, Levine AJ, Bhanot G, Rabadan R.

PLoS Pathog. 2008 Jun 6;4(6):e1000079. doi: 10.1371/journal.ppat.1000079.

13.

How viruses hijack cell regulation.

Davey NE, Travé G, Gibson TJ.

Trends Biochem Sci. 2011 Mar;36(3):159-69. doi: 10.1016/j.tibs.2010.10.002. Epub 2010 Dec 9.

PMID:
21146412
14.

Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferences.

Bahir I, Fromer M, Prat Y, Linial M.

Mol Syst Biol. 2009;5:311. doi: 10.1038/msb.2009.71. Epub 2009 Oct 13.

15.

Functional characterization of protein domains common to animal viruses and mouse.

Kinjo AR, Kumagai Y, Dinh H, Takeuchi O, Standley DM.

BMC Genomics. 2011 Nov 30;12 Suppl 3:S21. doi: 10.1186/1471-2164-12-S3-S21. Epub 2011 Nov 30.

16.

Viral proteomics: global evaluation of viruses and their interaction with the host.

Viswanathan K, Früh K.

Expert Rev Proteomics. 2007 Dec;4(6):815-29. Review.

PMID:
18067418
17.

Widespread horizontal gene transfer from circular single-stranded DNA viruses to eukaryotic genomes.

Liu H, Fu Y, Li B, Yu X, Xie J, Cheng J, Ghabrial SA, Li G, Yi X, Jiang D.

BMC Evol Biol. 2011 Sep 26;11:276. doi: 10.1186/1471-2148-11-276.

18.

Viral strategies to subvert the mammalian translation machinery.

Roberts LO, Jopling CL, Jackson RJ, Willis AE.

Prog Mol Biol Transl Sci. 2009;90:313-67. doi: 10.1016/S1877-1173(09)90009-6. Epub 2009 Oct 27. Review.

PMID:
20374746
19.

Molecular principles of human virus protein-protein interactions.

Halehalli RR, Nagarajaram HA.

Bioinformatics. 2015 Apr 1;31(7):1025-33. doi: 10.1093/bioinformatics/btu763. Epub 2014 Nov 21.

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