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Identification of cilia genes that affect cell-cycle progression using whole-genome transcriptome analysis in Chlamydomonas reinhardtti.

Albee AJ, Kwan AL, Lin H, Granas D, Stormo GD, Dutcher SK.

G3 (Bethesda). 2013 Jun 21;3(6):979-91. doi: 10.1534/g3.113.006338.


Proteomic analysis of isolated chlamydomonas centrioles reveals orthologs of ciliary-disease genes.

Keller LC, Romijn EP, Zamora I, Yates JR 3rd, Marshall WF.

Curr Biol. 2005 Jun 21;15(12):1090-8.


The UNI1 and UNI2 genes function in the transition of triplet to doublet microtubules between the centriole and cilium in Chlamydomonas.

Piasecki BP, Silflow CD.

Mol Biol Cell. 2009 Jan;20(1):368-78. doi: 10.1091/mbc.E08-09-0900. Epub 2008 Nov 12.


Transcriptome analysis of Chlamydomonas reinhardtii during the process of lipid accumulation.

Lv H, Qu G, Qi X, Lu L, Tian C, Ma Y.

Genomics. 2013 Apr;101(4):229-37. doi: 10.1016/j.ygeno.2013.01.004. Epub 2013 Feb 5.


The Chlamydomonas genome project: a decade on.

Blaby IK, Blaby-Haas CE, Tourasse N, Hom EF, Lopez D, Aksoy M, Grossman A, Umen J, Dutcher S, Porter M, King S, Witman GB, Stanke M, Harris EH, Goodstein D, Grimwood J, Schmutz J, Vallon O, Merchant SS, Prochnik S.

Trends Plant Sci. 2014 Oct;19(10):672-80. doi: 10.1016/j.tplants.2014.05.008. Epub 2014 Jun 17. Review.


Regulation of flagellar biogenesis by a calcium dependent protein kinase in Chlamydomonas reinhardtii.

Liang Y, Pan J.

PLoS One. 2013 Jul 25;8(7):e69902. doi: 10.1371/journal.pone.0069902. Print 2013.


Genome-wide transcriptional analysis of flagellar regeneration in Chlamydomonas reinhardtii identifies orthologs of ciliary disease genes.

Stolc V, Samanta MP, Tongprasit W, Marshall WF.

Proc Natl Acad Sci U S A. 2005 Mar 8;102(10):3703-7. Epub 2005 Feb 28.


Time-course global expression profiles of Chlamydomonas reinhardtii during photo-biological H₂ production.

Nguyen AV, Toepel J, Burgess S, Uhmeyer A, Blifernez O, Doebbe A, Hankamer B, Nixon P, Wobbe L, Kruse O.

PLoS One. 2011;6(12):e29364. doi: 10.1371/journal.pone.0029364. Epub 2011 Dec 29.


A NIMA-related kinase, Cnk2p, regulates both flagellar length and cell size in Chlamydomonas.

Bradley BA, Quarmby LM.

J Cell Sci. 2005 Aug 1;118(Pt 15):3317-26. Epub 2005 Jul 19.


Katanin knockdown supports a role for microtubule severing in release of basal bodies before mitosis in Chlamydomonas.

Rasi MQ, Parker JD, Feldman JL, Marshall WF, Quarmby LM.

Mol Biol Cell. 2009 Jan;20(1):379-88. doi: 10.1091/mbc.E07-10-1007. Epub 2008 Nov 12.


Cilium-generated signaling and cilia-related disorders.

Pan J, Wang Q, Snell WJ.

Lab Invest. 2005 Apr;85(4):452-63. Review.


Hemin and magnesium-protoporphyrin IX induce global changes in gene expression in Chlamydomonas reinhardtii.

Voss B, Meinecke L, Kurz T, Al-Babili S, Beck CF, Hess WR.

Plant Physiol. 2011 Feb;155(2):892-905. doi: 10.1104/pp.110.158683. Epub 2010 Dec 9.


Exploring the transcriptome of ciliated cells using in silico dissection of human tissues.

Ivliev AE, 't Hoen PA, van Roon-Mom WM, Peters DJ, Sergeeva MG.

PLoS One. 2012;7(4):e35618. doi: 10.1371/journal.pone.0035618. Epub 2012 Apr 25.


Flagellar length control in chlamydomonas--paradigm for organelle size regulation.

Wemmer KA, Marshall WF.

Int Rev Cytol. 2007;260:175-212. Review.


Prevalence, evolution, and cis-regulation of diel transcription in Chlamydomonas reinhardtii.

Panchy N, Wu G, Newton L, Tsai CH, Chen J, Benning C, Farré EM, Shiu SH.

G3 (Bethesda). 2014 Oct 28;4(12):2461-71. doi: 10.1534/g3.114.015032.


Comparative genomics identifies a flagellar and basal body proteome that includes the BBS5 human disease gene.

Li JB, Gerdes JM, Haycraft CJ, Fan Y, Teslovich TM, May-Simera H, Li H, Blacque OE, Li L, Leitch CC, Lewis RA, Green JS, Parfrey PS, Leroux MR, Davidson WS, Beales PL, Guay-Woodford LM, Yoder BK, Stormo GD, Katsanis N, Dutcher SK.

Cell. 2004 May 14;117(4):541-52.


PF19 encodes the p60 catalytic subunit of katanin and is required for assembly of the flagellar central apparatus in Chlamydomonas.

Dymek EE, Smith EF.

J Cell Sci. 2012 Jul 15;125(Pt 14):3357-66. doi: 10.1242/jcs.096941. Epub 2012 Mar 30.


External light conditions and internal cell cycle phases coordinate accumulation of chloroplast and mitochondrial transcripts in the red alga Cyanidioschyzon merolae.

Kanesaki Y, Imamura S, Minoda A, Tanaka K.

DNA Res. 2012 Jun;19(3):289-303. doi: 10.1093/dnares/dss013. Epub 2012 Apr 19.

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