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Results: 1 to 20 of 123

1.

Exploring the molecular mechanism of trimethylamine-N-oxide's ability to counteract the protein denaturing effects of urea.

Sarma R, Paul S.

J Phys Chem B. 2013 May 9;117(18):5691-704. doi: 10.1021/jp401750v. Epub 2013 Apr 29.

PMID:
23586614
[PubMed - indexed for MEDLINE]
2.

Interactions of S-peptide analogue in aqueous urea and trimethylamine-N-oxide solutions: a molecular dynamics simulation study.

Sarma R, Paul S.

J Chem Phys. 2013 Jul 21;139(3):034504. doi: 10.1063/1.4813502.

PMID:
23883044
[PubMed - indexed for MEDLINE]
3.

Crucial importance of water structure modification on trimethylamine N-oxide counteracting effect at high pressure.

Sarma R, Paul S.

J Phys Chem B. 2013 Jan 17;117(2):677-89. doi: 10.1021/jp311102v. Epub 2013 Jan 9.

PMID:
23268746
[PubMed - indexed for MEDLINE]
4.

Trimethylamine-N-oxide's effect on polypeptide solvation at high pressure: a molecular dynamics simulation study.

Sarma R, Paul S.

J Phys Chem B. 2013 Aug 1;117(30):9056-66. doi: 10.1021/jp405202j. Epub 2013 Jul 17.

PMID:
23802905
[PubMed - indexed for MEDLINE]
5.

Structure and interaction in aqueous urea-trimethylamine-N-oxide solutions.

Paul S, Patey GN.

J Am Chem Soc. 2007 Apr 11;129(14):4476-82. Epub 2007 Mar 21.

PMID:
17373796
[PubMed - indexed for MEDLINE]
6.

Counteraction of urea by trimethylamine N-oxide is due to direct interaction.

Meersman F, Bowron D, Soper AK, Koch MH.

Biophys J. 2009 Nov 4;97(9):2559-66. doi: 10.1016/j.bpj.2009.08.017. Erratum in: Biophys J. 2010 Jan 6;98(1):174.

PMID:
19883599
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Effects of urea, tetramethyl urea, and trimethylamine N-oxide on aqueous solution structure and solvation of protein backbones: a molecular dynamics simulation study.

Wei H, Fan Y, Gao YQ.

J Phys Chem B. 2010 Jan 14;114(1):557-68. doi: 10.1021/jp9084926.

PMID:
19928871
[PubMed - indexed for MEDLINE]
8.

The effect of aqueous solutions of trimethylamine-N-oxide on pressure induced modifications of hydrophobic interactions.

Sarma R, Paul S.

J Chem Phys. 2012 Sep 7;137(9):094502. doi: 10.1063/1.4748101.

PMID:
22957576
[PubMed - indexed for MEDLINE]
9.

The molecular mechanism of stabilization of proteins by TMAO and its ability to counteract the effects of urea.

Zou Q, Bennion BJ, Daggett V, Murphy KP.

J Am Chem Soc. 2002 Feb 20;124(7):1192-202.

PMID:
11841287
[PubMed - indexed for MEDLINE]
10.

Destabilization of the hydrogen-bond structure of water by the osmolyte trimethylamine N-oxide.

Rezus YL, Bakker HJ.

J Phys Chem B. 2009 Apr 2;113(13):4038-44.

PMID:
19425246
[PubMed - indexed for MEDLINE]
11.

Effect of trimethylamine-N-oxide on pressure-induced dissolution of hydrophobic solute.

Sarma R, Paul S.

J Chem Phys. 2012 Sep 21;137(11):114503.

PMID:
22998267
[PubMed - indexed for MEDLINE]
12.

Counteraction of urea-induced protein denaturation by trimethylamine N-oxide: a chemical chaperone at atomic resolution.

Bennion BJ, Daggett V.

Proc Natl Acad Sci U S A. 2004 Apr 27;101(17):6433-8. Epub 2004 Apr 19.

PMID:
15096583
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Hydrophobic interactions in urea-trimethylamine-N-oxide solutions.

Paul S, Patey GN.

J Phys Chem B. 2008 Sep 4;112(35):11106-11. doi: 10.1021/jp803956s. Epub 2008 Aug 7.

PMID:
18683967
[PubMed - indexed for MEDLINE]
14.

Volume exclusion and H-bonding dominate the thermodynamics and solvation of trimethylamine-N-oxide in aqueous urea.

Rösgen J, Jackson-Atogi R.

J Am Chem Soc. 2012 Feb 22;134(7):3590-7. doi: 10.1021/ja211530n. Epub 2012 Feb 10. Erratum in: J Am Chem Soc. 2012 Aug 29;134(34):14263.

PMID:
22280147
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

How does trimethylamine N-oxide counteract the denaturing activity of urea?

Graziano G.

Phys Chem Chem Phys. 2011 Oct 21;13(39):17689-95. doi: 10.1039/c1cp22176k. Epub 2011 Sep 6.

PMID:
21894338
[PubMed - indexed for MEDLINE]
16.
17.

Molecular mechanism for the preferential exclusion of TMAO from protein surfaces.

Canchi DR, Jayasimha P, Rau DC, Makhatadze GI, Garcia AE.

J Phys Chem B. 2012 Oct 11;116(40):12095-104. doi: 10.1021/jp304298c. Epub 2012 Oct 1.

PMID:
22970901
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

When does trimethylamine N-oxide fold a polymer chain and urea unfold it?

Mondal J, Stirnemann G, Berne BJ.

J Phys Chem B. 2013 Jul 25;117(29):8723-32. doi: 10.1021/jp405609j. Epub 2013 Jul 10.

PMID:
23800089
[PubMed - indexed for MEDLINE]
19.

Effects of urea and trimethylamine-N-oxide on the properties of water and the secondary structure of hen egg white lysozyme.

Panuszko A, Bruździak P, Zielkiewicz J, Wyrzykowski D, Stangret J.

J Phys Chem B. 2009 Nov 5;113(44):14797-809. doi: 10.1021/jp904001m.

PMID:
19813739
[PubMed - indexed for MEDLINE]
20.

Association of small hydrophobic solute in presence of the osmolytes urea and trimethylamine-N-oxide.

Sarma R, Paul S.

J Phys Chem B. 2012 Mar 8;116(9):2831-41. doi: 10.1021/jp2104402. Epub 2012 Feb 24.

PMID:
22300285
[PubMed - indexed for MEDLINE]

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