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Results: 1 to 20 of 102

1.

RNA-dependent genome processing during nuclear differentiation: the model systems of stichotrichous ciliates.

Fuhrmann G, Swart E, Nowacki M, Lipps HJ.

Epigenomics. 2013 Apr;5(2):229-36. doi: 10.2217/epi.13.15.

PMID:
23566098
[PubMed - indexed for MEDLINE]
2.

The unusual way to make a genetically active nucleus.

Jönsson F, Postberg J, Lipps HJ.

DNA Cell Biol. 2009 Feb;28(2):71-8. doi: 10.1089/dna.2008.0806. Review.

PMID:
19196049
[PubMed - indexed for MEDLINE]
3.

RNA-dependent control of gene amplification.

Heyse G, Jönsson F, Chang WJ, Lipps HJ.

Proc Natl Acad Sci U S A. 2010 Dec 21;107(51):22134-9. doi: 10.1073/pnas.1009284107. Epub 2010 Oct 25.

PMID:
20974970
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27 nt small RNAs derived from the parental macronucleus.

Zahler AM, Neeb ZT, Lin A, Katzman S.

PLoS One. 2012;7(8):e42371. doi: 10.1371/journal.pone.0042371. Epub 2012 Aug 10.

PMID:
22900016
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

snRNA and heterochromatin formation are involved in DNA excision during macronuclear development in stichotrichous ciliates.

Juranek SA, Rupprecht S, Postberg J, Lipps HJ.

Eukaryot Cell. 2005 Nov;4(11):1934-41. Erratum in: Eukaryot Cell. 2008 Sep;7(9):1616.

PMID:
16278460
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

DNA rearrangements directed by non-coding RNAs in ciliates.

Mochizuki K.

Wiley Interdiscip Rev RNA. 2010 Nov-Dec;1(3):376-87. doi: 10.1002/wrna.34. Review.

PMID:
21956937
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Piwi-interacting RNAs protect DNA against loss during Oxytricha genome rearrangement.

Fang W, Wang X, Bracht JR, Nowacki M, Landweber LF.

Cell. 2012 Dec 7;151(6):1243-55. doi: 10.1016/j.cell.2012.10.045.

PMID:
23217708
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Synthesis of pre-rRNA and mRNA is directed to a chromatin-poor compartment in the macronucleus of the spirotrichous ciliate Stylonychia lemnae.

Postberg J, Alexandrova O, Lipps HJ.

Chromosome Res. 2006;14(2):161-75. Epub 2006 Mar 17.

PMID:
16544190
[PubMed - indexed for MEDLINE]
9.

Modulating somatic DNA copy number through maternal RNA.

Yao MC.

Proc Natl Acad Sci U S A. 2010 Dec 21;107(51):21951-2. doi: 10.1073/pnas.1017135108. Epub 2010 Dec 13. No abstract available.

PMID:
21149732
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

DNA elimination in ciliates: transposon domestication and genome surveillance.

Chalker DL, Yao MC.

Annu Rev Genet. 2011;45:227-46. doi: 10.1146/annurev-genet-110410-132432. Epub 2011 Sep 9. Review.

PMID:
21910632
[PubMed - indexed for MEDLINE]
11.

Exploiting Oxytricha trifallax nanochromosomes to screen for non-coding RNA genes.

Jung S, Swart EC, Minx PJ, Magrini V, Mardis ER, Landweber LF, Eddy SR.

Nucleic Acids Res. 2011 Sep 1;39(17):7529-47. doi: 10.1093/nar/gkr501. Epub 2011 Jun 28.

PMID:
21715380
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomes.

Swart EC, Bracht JR, Magrini V, Minx P, Chen X, Zhou Y, Khurana JS, Goldman AD, Nowacki M, Schotanus K, Jung S, Fulton RS, Ly A, McGrath S, Haub K, Wiggins JL, Storton D, Matese JC, Parsons L, Chang WJ, Bowen MS, Stover NA, Jones TA, Eddy SR, Herrick GA, Doak TG, Wilson RK, Mardis ER, Landweber LF.

PLoS Biol. 2013;11(1):e1001473. doi: 10.1371/journal.pbio.1001473. Epub 2013 Jan 29.

PMID:
23382650
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

RNA-directed epigenetic regulation of DNA rearrangements.

Mochizuki K.

Essays Biochem. 2010 Sep 20;48(1):89-100. doi: 10.1042/bse0480089. Review.

PMID:
20822488
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Template-guided recombination for IES elimination and unscrambling of genes in stichotrichous ciliates.

Prescott DM, Ehrenfeucht A, Rozenberg G.

J Theor Biol. 2003 Jun 7;222(3):323-30.

PMID:
12732478
[PubMed - indexed for MEDLINE]
15.

Reordering of nine exons is necessary to form a functional actin gene in Oxytricha nova.

Greslin AF, Prescott DM, Oka Y, Loukin SH, Chappell JC.

Proc Natl Acad Sci U S A. 1989 Aug;86(16):6264-8.

PMID:
2503830
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

RNA-mediated epigenetic programming of a genome-rearrangement pathway.

Nowacki M, Vijayan V, Zhou Y, Schotanus K, Doak TG, Landweber LF.

Nature. 2008 Jan 10;451(7175):153-8. Epub 2007 Nov 28.

PMID:
18046331
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

The DNA of ciliated protozoa.

Prescott DM.

Microbiol Rev. 1994 Jun;58(2):233-67. Review.

PMID:
8078435
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

A microarray analysis of developmentally regulated genes during macronuclear differentiation in the stichotrichous ciliate Stylonychia lemnae.

Paschka AG, Horejschi V, Jönsson F, Lindecke A, Weier G, Kaltschmidt C, Lipps HJ.

Gene. 2005 Oct 10;359:81-90.

PMID:
16150557
[PubMed - indexed for MEDLINE]
19.

RNA-mediated epigenetic regulation of DNA copy number.

Nowacki M, Haye JE, Fang W, Vijayan V, Landweber LF.

Proc Natl Acad Sci U S A. 2010 Dec 21;107(51):22140-4. doi: 10.1073/pnas.1012236107. Epub 2010 Nov 15.

PMID:
21078984
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Non-Mendelian inheritance and homology-dependent effects in ciliates.

Meyer E, Garnier O.

Adv Genet. 2002;46:305-37. Review.

PMID:
11931229
[PubMed - indexed for MEDLINE]

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