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Results: 1 to 20 of 105

1.

Evidence for climate-driven diversification? A caution for interpreting ABC inferences of simultaneous historical events.

Oaks JR, Sukumaran J, Esselstyn JA, Linkem CW, Siler CD, Holder MT, Brown RM.

Evolution. 2013 Apr;67(4):991-1010. doi: 10.1111/j.1558-5646.2012.01840.x. Epub 2012 Dec 11.

PMID:
23550751
[PubMed - indexed for MEDLINE]
2.

Implications of uniformly distributed, empirically informed priors for phylogeographical model selection: A reply to Hickerson et al.

Oaks JR, Linkem CW, Sukumaran J.

Evolution. 2014 Dec;68(12):3607-17. doi: 10.1111/evo.12523. Epub 2014 Oct 13.

PMID:
25213163
[PubMed - in process]
3.

Recommendations for using msBayes to incorporate uncertainty in selecting an abc model prior: a response to oaks et Al.

Hickerson MJ, Stone GN, Lohse K, Demos TC, Xie X, Landerer C, Takebayashi N.

Evolution. 2014 Jan;68(1):284-94. doi: 10.1111/evo.12241. Epub 2013 Sep 16. Erratum in: Evolution. 2014 May;68(5):1552.

PMID:
24102483
[PubMed - indexed for MEDLINE]
4.

msBayes: pipeline for testing comparative phylogeographic histories using hierarchical approximate Bayesian computation.

Hickerson MJ, Stahl E, Takebayashi N.

BMC Bioinformatics. 2007 Jul 26;8:268.

PMID:
17655753
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

An improved approximate-Bayesian model-choice method for estimating shared evolutionary history.

Oaks JR.

BMC Evol Biol. 2014 Jul 3;14:150. doi: 10.1186/1471-2148-14-150.

PMID:
24992937
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Test for simultaneous divergence using approximate Bayesian computation.

Hickerson MJ, Stahl EA, Lessios HA.

Evolution. 2006 Dec;60(12):2435-53.

PMID:
17263107
[PubMed - indexed for MEDLINE]
7.

MTML-msBayes: approximate Bayesian comparative phylogeographic inference from multiple taxa and multiple loci with rate heterogeneity.

Huang W, Takebayashi N, Qi Y, Hickerson MJ.

BMC Bioinformatics. 2011 Jan 3;12:1. doi: 10.1186/1471-2105-12-1.

PMID:
21199577
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Phylogeography and diversification history of the day-gecko genus Phelsuma in the Seychelles islands.

Rocha S, Posada D, Harris DJ.

BMC Evol Biol. 2013 Jan 5;13:3. doi: 10.1186/1471-2148-13-3.

PMID:
23289814
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Testing comparative phylogeographic models of marine vicariance and dispersal using a hierarchical Bayesian approach.

Hickerson MJ, Meyer CP.

BMC Evol Biol. 2008 Nov 27;8:322. doi: 10.1186/1471-2148-8-322.

PMID:
19038027
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Estimating a geographically explicit model of population divergence.

Knowles LL, Carstens BC.

Evolution. 2007 Mar;61(3):477-93.

PMID:
17348914
[PubMed - indexed for MEDLINE]
11.

Shifting distributions and speciation: species divergence during rapid climate change.

Carstens BC, Knowles LL.

Mol Ecol. 2007 Feb;16(3):619-27.

PMID:
17257117
[PubMed - indexed for MEDLINE]
12.

Population history of the Hispaniolan hutia Plagiodontia aedium (Rodentia: Capromyidae): testing the model of ancient differentiation on a geotectonically complex Caribbean island.

Brace S, Barnes I, Powell A, Pearson R, Woolaver LG, Thomas MG, Turvey ST.

Mol Ecol. 2012 May;21(9):2239-53. doi: 10.1111/j.1365-294X.2012.05514.x. Epub 2012 Mar 8.

PMID:
22404699
[PubMed - indexed for MEDLINE]
13.

Two pulses of diversification across the Isthmus of Tehuantepec in a montane Mexican bird fauna.

Barber BR, Klicka J.

Proc Biol Sci. 2010 Sep 7;277(1694):2675-81. doi: 10.1098/rspb.2010.0343. Epub 2010 Apr 21.

PMID:
20410037
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Effects of climatic and geological processes during the pleistocene on the evolutionary history of the northern cavefish, Amblyopsis spelaea (teleostei: amblyopsidae).

Niemiller ML, McCandless JR, Reynolds RG, Caddle J, Near TJ, Tillquist CR, Pearson WD, Fitzpatrick BM.

Evolution. 2013 Apr;67(4):1011-25. doi: 10.1111/evo.12017. Epub 2012 Dec 20.

PMID:
23550752
[PubMed - indexed for MEDLINE]
15.

Testing species-level diversification hypotheses in Madagascar: the case of microendemic Brookesia leaf chameleons.

Townsend TM, Vieites DR, Glaw F, Vences M.

Syst Biol. 2009 Dec;58(6):641-56. doi: 10.1093/sysbio/syp073. Epub 2009 Nov 10.

PMID:
20525615
[PubMed - indexed for MEDLINE]
16.

Coupling genetic and ecological-niche models to examine how past population distributions contribute to divergence.

Knowles LL, Carstens BC, Keat ML.

Curr Biol. 2007 Jun 5;17(11):940-6. Epub 2007 May 3.

PMID:
17475496
[PubMed - indexed for MEDLINE]
Free Article
17.

Climate-driven diversification in two widespread Galerida larks.

Guillaumet A, Crochet PA, Pons JM.

BMC Evol Biol. 2008 Jan 29;8:32. doi: 10.1186/1471-2148-8-32.

PMID:
18230151
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Climate-driven diversification and Pleistocene refugia in Philippine birds: evidence from phylogeographic structure and paleoenvironmental niche modeling.

Hosner PA, Sánchez-González LA, Peterson AT, Moyle RG.

Evolution. 2014 Sep;68(9):2658-74. doi: 10.1111/evo.12459. Epub 2014 Jul 10.

PMID:
24890129
[PubMed - in process]
19.

Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays.

McCormack JE, Heled J, Delaney KS, Peterson AT, Knowles LL.

Evolution. 2011 Jan;65(1):184-202. doi: 10.1111/j.1558-5646.2010.01097.x.

PMID:
20681982
[PubMed - indexed for MEDLINE]

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