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Results: 1 to 20 of 243

1.

Web 2.0-based crowdsourcing for high-quality gold standard development in clinical natural language processing.

Zhai H, Lingren T, Deleger L, Li Q, Kaiser M, Stoutenborough L, Solti I.

J Med Internet Res. 2013 Apr 2;15(4):e73. doi: 10.2196/jmir.2426.

PMID:
23548263
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Crowdsourcing image annotation for nucleus detection and segmentation in computational pathology: evaluating experts, automated methods, and the crowd.

Irshad H, Montaser-Kouhsari L, Waltz G, Bucur O, Nowak JA, Dong F, Knoblauch NW, Beck AH.

Pac Symp Biocomput. 2015;20:294-305.

PMID:
25592590
[PubMed - in process]
Free Article
3.

Microtask crowdsourcing for disease mention annotation in pubmed abstracts.

Good BM, Nanis M, Wu C, Su AI.

Pac Symp Biocomput. 2015;20:282-93.

PMID:
25592589
[PubMed - in process]
Free Article
4.

Evaluating the impact of pre-annotation on annotation speed and potential bias: natural language processing gold standard development for clinical named entity recognition in clinical trial announcements.

Lingren T, Deleger L, Molnar K, Zhai H, Meinzen-Derr J, Kaiser M, Stoutenborough L, Li Q, Solti I.

J Am Med Inform Assoc. 2014 May-Jun;21(3):406-13. doi: 10.1136/amiajnl-2013-001837. Epub 2013 Sep 3.

PMID:
24001514
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Building gold standard corpora for medical natural language processing tasks.

Deleger L, Li Q, Lingren T, Kaiser M, Molnar K, Stoutenborough L, Kouril M, Marsolo K, Solti I.

AMIA Annu Symp Proc. 2012;2012:144-53. Epub 2012 Nov 3.

PMID:
23304283
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Cameras for Public Health Surveillance: A Methods Protocol for Crowdsourced Annotation of Point-of-Sale Photographs.

Ilakkuvan V, Tacelosky M, Ivey KC, Pearson JL, Cantrell J, Vallone DM, Abrams DB, Kirchner TR.

JMIR Res Protoc. 2014 Apr 9;3(2):e22. doi: 10.2196/resprot.3277.

PMID:
24717168
[PubMed]
Free PMC Article
7.

Crowdsourcing a normative natural language dataset: a comparison of Amazon Mechanical Turk and in-lab data collection.

Saunders DR, Bex PJ, Woods RL.

J Med Internet Res. 2013 May 20;15(5):e100. doi: 10.2196/jmir.2620.

PMID:
23689038
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Crowdsourcing participatory evaluation of medical pictograms using Amazon Mechanical Turk.

Yu B, Willis M, Sun P, Wang J.

J Med Internet Res. 2013 Jun 3;15(6):e108. doi: 10.2196/jmir.2513.

PMID:
23732572
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

NCBI disease corpus: a resource for disease name recognition and concept normalization.

Do─čan RI, Leaman R, Lu Z.

J Biomed Inform. 2014 Feb;47:1-10. doi: 10.1016/j.jbi.2013.12.006. Epub 2014 Jan 3.

PMID:
24393765
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Evaluation of a novel Conjunctive Exploratory Navigation Interface for consumer health information: a crowdsourced comparative study.

Cui L, Carter R, Zhang GQ.

J Med Internet Res. 2014 Feb 10;16(2):e45. doi: 10.2196/jmir.3111.

PMID:
24513593
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Recognition of medication information from discharge summaries using ensembles of classifiers.

Doan S, Collier N, Xu H, Pham HD, Tu MP.

BMC Med Inform Decis Mak. 2012 May 7;12:36. doi: 10.1186/1472-6947-12-36.

PMID:
22564405
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Assessment of disease named entity recognition on a corpus of annotated sentences.

Jimeno A, Jimenez-Ruiz E, Lee V, Gaudan S, Berlanga R, Rebholz-Schuhmann D.

BMC Bioinformatics. 2008 Apr 11;9 Suppl 3:S3. doi: 10.1186/1471-2105-9-S3-S3.

PMID:
18426548
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Concept annotation in the CRAFT corpus.

Bada M, Eckert M, Evans D, Garcia K, Shipley K, Sitnikov D, Baumgartner WA Jr, Cohen KB, Verspoor K, Blake JA, Hunter LE.

BMC Bioinformatics. 2012 Jul 9;13:161. doi: 10.1186/1471-2105-13-161.

PMID:
22776079
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Towards comprehensive syntactic and semantic annotations of the clinical narrative.

Albright D, Lanfranchi A, Fredriksen A, Styler WF 4th, Warner C, Hwang JD, Choi JD, Dligach D, Nielsen RD, Martin J, Ward W, Palmer M, Savova GK.

J Am Med Inform Assoc. 2013 Sep-Oct;20(5):922-30. doi: 10.1136/amiajnl-2012-001317. Epub 2013 Jan 25.

PMID:
23355458
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

PREDOSE: a semantic web platform for drug abuse epidemiology using social media.

Cameron D, Smith GA, Daniulaityte R, Sheth AP, Dave D, Chen L, Anand G, Carlson R, Watkins KZ, Falck R.

J Biomed Inform. 2013 Dec;46(6):985-97. doi: 10.1016/j.jbi.2013.07.007. Epub 2013 Jul 25.

PMID:
23892295
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A sequence labeling approach to link medications and their attributes in clinical notes and clinical trial announcements for information extraction.

Li Q, Zhai H, Deleger L, Lingren T, Kaiser M, Stoutenborough L, Solti I.

J Am Med Inform Assoc. 2013 Sep-Oct;20(5):915-21. doi: 10.1136/amiajnl-2012-001487. Epub 2012 Dec 25.

PMID:
23268488
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Large-scale evaluation of automated clinical note de-identification and its impact on information extraction.

Deleger L, Molnar K, Savova G, Xia F, Lingren T, Li Q, Marsolo K, Jegga A, Kaiser M, Stoutenborough L, Solti I.

J Am Med Inform Assoc. 2013 Jan 1;20(1):84-94. doi: 10.1136/amiajnl-2012-001012. Epub 2012 Aug 2.

PMID:
22859645
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Generation of silver standard concept annotations from biomedical texts with special relevance to phenotypes.

Oellrich A, Collier N, Smedley D, Groza T.

PLoS One. 2015 Jan 21;10(1):e0116040. doi: 10.1371/journal.pone.0116040. eCollection 2015.

PMID:
25607983
[PubMed - in process]
Free PMC Article
19.

Assisted annotation of medical free text using RapTAT.

Gobbel GT, Garvin J, Reeves R, Cronin RM, Heavirland J, Williams J, Weaver A, Jayaramaraja S, Giuse D, Speroff T, Brown SH, Xu H, Matheny ME.

J Am Med Inform Assoc. 2014 Sep-Oct;21(5):833-41. doi: 10.1136/amiajnl-2013-002255. Epub 2014 Jan 15.

PMID:
24431336
[PubMed - indexed for MEDLINE]
20.

Common data model for natural language processing based on two existing standard information models: CDA+GrAF.

Meystre SM, Lee S, Jung CY, Chevrier RD.

J Biomed Inform. 2012 Aug;45(4):703-10. doi: 10.1016/j.jbi.2011.11.018. Epub 2011 Dec 8.

PMID:
22197801
[PubMed - indexed for MEDLINE]
Free Article
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