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Functional small RNAs are generated from select miRNA hairpin loops in flies and mammals.

Okamura K, Ladewig E, Zhou L, Lai EC.

Genes Dev. 2013 Apr 1;27(7):778-92. doi: 10.1101/gad.211698.112. Epub 2013 Mar 27.


Intertwined pathways for Argonaute-mediated microRNA biogenesis in Drosophila.

Yang JS, Smibert P, Westholm JO, Jee D, Maurin T, Lai EC.

Nucleic Acids Res. 2014 Feb;42(3):1987-2002. doi: 10.1093/nar/gkt1038. Epub 2013 Nov 12.


Argonaute loading improves the 5' precision of both MicroRNAs and their miRNA* strands in flies.

Seitz H, Ghildiyal M, Zamore PD.

Curr Biol. 2008 Jan 22;18(2):147-51. doi: 10.1016/j.cub.2007.12.049.


Structural determinants of miRNAs for RISC loading and slicer-independent unwinding.

Kawamata T, Seitz H, Tomari Y.

Nat Struct Mol Biol. 2009 Sep;16(9):953-60. doi: 10.1038/nsmb.1630. Epub 2009 Aug 16.


The 3'-to-5' exoribonuclease Nibbler shapes the 3' ends of microRNAs bound to Drosophila Argonaute1.

Han BW, Hung JH, Weng Z, Zamore PD, Ameres SL.

Curr Biol. 2011 Nov 22;21(22):1878-87. doi: 10.1016/j.cub.2011.09.034. Epub 2011 Nov 3.


Sorting of Drosophila small silencing RNAs.

Tomari Y, Du T, Zamore PD.

Cell. 2007 Jul 27;130(2):299-308.


Sorting of Drosophila small silencing RNAs partitions microRNA* strands into the RNA interference pathway.

Ghildiyal M, Xu J, Seitz H, Weng Z, Zamore PD.

RNA. 2010 Jan;16(1):43-56. doi: 10.1261/rna.1972910. Epub 2009 Nov 16.


The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila.

Okamura K, Hagen JW, Duan H, Tyler DM, Lai EC.

Cell. 2007 Jul 13;130(1):89-100. Epub 2007 Jun 28.


Distinct mechanisms for microRNA strand selection by Drosophila Argonautes.

Okamura K, Liu N, Lai EC.

Mol Cell. 2009 Nov 13;36(3):431-44. doi: 10.1016/j.molcel.2009.09.027.


MicroRNA biogenesis via splicing and exosome-mediated trimming in Drosophila.

Flynt AS, Greimann JC, Chung WJ, Lima CD, Lai EC.

Mol Cell. 2010 Jun 25;38(6):900-7. doi: 10.1016/j.molcel.2010.06.014.


Characterization of the miRNA-RISC loading complex and miRNA-RISC formed in the Drosophila miRNA pathway.

Miyoshi K, Okada TN, Siomi H, Siomi MC.

RNA. 2009 Jul;15(7):1282-91. doi: 10.1261/rna.1541209. Epub 2009 May 18.


Loop-miRs: active microRNAs generated from single-stranded loop regions.

Winter J, Link S, Witzigmann D, Hildenbrand C, Previti C, Diederichs S.

Nucleic Acids Res. 2013 May 1;41(10):5503-12. doi: 10.1093/nar/gkt251. Epub 2013 Apr 10.


Common and distinct patterns of terminal modifications to mirtrons and canonical microRNAs.

Westholm JO, Ladewig E, Okamura K, Robine N, Lai EC.

RNA. 2012 Feb;18(2):177-92. doi: 10.1261/rna.030627.111. Epub 2011 Dec 21.


Hierarchical rules for Argonaute loading in Drosophila.

Czech B, Zhou R, Erlich Y, Brennecke J, Binari R, Villalta C, Gordon A, Perrimon N, Hannon GJ.

Mol Cell. 2009 Nov 13;36(3):445-56. doi: 10.1016/j.molcel.2009.09.028.


The Drosophila hairpin RNA pathway generates endogenous short interfering RNAs.

Okamura K, Chung WJ, Ruby JG, Guo H, Bartel DP, Lai EC.

Nature. 2008 Jun 5;453(7196):803-6. doi: 10.1038/nature07015. Epub 2008 May 7.


Target RNA-directed tailing and trimming purifies the sorting of endo-siRNAs between the two Drosophila Argonaute proteins.

Ameres SL, Hung JH, Xu J, Weng Z, Zamore PD.

RNA. 2011 Jan;17(1):54-63. doi: 10.1261/rna.2498411. Epub 2010 Nov 24.


The Arabidopsis thaliana double-stranded RNA binding protein DRB1 directs guide strand selection from microRNA duplexes.

Eamens AL, Smith NA, Curtin SJ, Wang MB, Waterhouse PM.

RNA. 2009 Dec;15(12):2219-35. doi: 10.1261/rna.1646909. Epub 2009 Oct 27.


Intronic microRNA precursors that bypass Drosha processing.

Ruby JG, Jan CH, Bartel DP.

Nature. 2007 Jul 5;448(7149):83-6. Epub 2007 Jun 24.


Slicing-independent RISC activation requires the argonaute PAZ domain.

Gu S, Jin L, Huang Y, Zhang F, Kay MA.

Curr Biol. 2012 Aug 21;22(16):1536-42. doi: 10.1016/j.cub.2012.06.040. Epub 2012 Jul 12.


Argonaute divides its RNA guide into domains with distinct functions and RNA-binding properties.

Wee LM, Flores-Jasso CF, Salomon WE, Zamore PD.

Cell. 2012 Nov 21;151(5):1055-67. doi: 10.1016/j.cell.2012.10.036. Erratum in: Cell. 2013 Jan 17;152(1-2):366.

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