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Similar articles for PubMed (Select 23499947)

1.

Identification of novel exons and transcripts by comprehensive RNA-Seq of horn cancer transcriptome in Bos indicus.

Jakhesara SJ, Koringa PG, Joshi CG.

J Biotechnol. 2013 May 10;165(1):37-44. doi: 10.1016/j.jbiotec.2013.02.015. Epub 2013 Mar 14.

PMID:
23499947
2.

Transcriptome analysis and SNP identification in SCC of horn in (Bos indicus) Indian cattle.

Koringa PG, Jakhesara SJ, Bhatt VD, Patel AB, Dash D, Joshi CG.

Gene. 2013 Nov 1;530(1):119-26. doi: 10.1016/j.gene.2013.07.061. Epub 2013 Aug 24.

PMID:
23978612
3.

Comprehensive transcriptome profiling of squamous cell carcinoma of horn in Bos indicus.

Koringa PG, Jakhesara SJ, Bhatt VD, Meshram CP, Patel AK, Fefar DT, Joshi CG.

Vet Comp Oncol. 2013 Dec 6. doi: 10.1111/vco.12079. [Epub ahead of print]

PMID:
24314272
4.

A preliminary sketch of horn cancer transcriptome in Indian zebu cattle.

Tripathi AK, Koringa PG, Jakhesara SJ, Ahir VB, Ramani UV, Bhatt VD, Sajnani MR, Patel DA, Joshi AJ, Shanmuga SJ, Rank DN, Joshi CG.

Gene. 2012 Feb 1;493(1):124-31. doi: 10.1016/j.gene.2011.11.007. Epub 2011 Nov 15.

PMID:
22134011
5.

RNA-Seq profiling reveals novel hepatic gene expression pattern in aflatoxin B1 treated rats.

Merrick BA, Phadke DP, Auerbach SS, Mav D, Stiegelmeyer SM, Shah RR, Tice RR.

PLoS One. 2013 Apr 22;8(4):e61768. doi: 10.1371/journal.pone.0061768. Print 2013.

6.

Combining RT-PCR-seq and RNA-seq to catalog all genic elements encoded in the human genome.

Howald C, Tanzer A, Chrast J, Kokocinski F, Derrien T, Walters N, Gonzalez JM, Frankish A, Aken BL, Hourlier T, Vogel JH, White S, Searle S, Harrow J, Hubbard TJ, Guigó R, Reymond A.

Genome Res. 2012 Sep;22(9):1698-710. doi: 10.1101/gr.134478.111.

7.

High-throughput sequencing and analysis of the gill tissue transcriptome from the deep-sea hydrothermal vent mussel Bathymodiolus azoricus.

Bettencourt R, Pinheiro M, Egas C, Gomes P, Afonso M, Shank T, Santos RS.

BMC Genomics. 2010 Oct 11;11:559. doi: 10.1186/1471-2164-11-559.

8.

Next-generation sequencing facilitates quantitative analysis of wild-type and Nrl(-/-) retinal transcriptomes.

Brooks MJ, Rajasimha HK, Roger JE, Swaroop A.

Mol Vis. 2011;17:3034-54. Epub 2011 Nov 23.

9.

Identification of gene fusion transcripts by transcriptome sequencing in BRCA1-mutated breast cancers and cell lines.

Ha KC, Lalonde E, Li L, Cavallone L, Natrajan R, Lambros MB, Mitsopoulos C, Hakas J, Kozarewa I, Fenwick K, Lord CJ, Ashworth A, Vincent-Salomon A, Basik M, Reis-Filho JS, Majewski J, Foulkes WD.

BMC Med Genomics. 2011 Oct 27;4:75. doi: 10.1186/1755-8794-4-75.

10.

Transcriptome profiling of the cancer, adjacent non-tumor and distant normal tissues from a colorectal cancer patient by deep sequencing.

Wu Y, Wang X, Wu F, Huang R, Xue F, Liang G, Tao M, Cai P, Huang Y.

PLoS One. 2012;7(8):e41001. doi: 10.1371/journal.pone.0041001. Epub 2012 Aug 8.

11.

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.

Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, Zhang J, Jiang Y, Zhang H, Wang X, Rajendran KV, Khoo L, Kucuktas H, Peatman E, Liu Z.

BMC Genomics. 2012 Nov 5;13:595. doi: 10.1186/1471-2164-13-595.

12.

Identification of novel splice variants in horn cancer by RNA-Seq analysis in Zebu cattle.

Patel AK, Bhatt VD, Tripathi AK, Sajnani MR, Jakhesara SJ, Koringa PG, Joshi CG.

Genomics. 2013 Jan;101(1):57-63. doi: 10.1016/j.ygeno.2012.10.001. Epub 2012 Oct 10.

13.

Identification of novel transcripts deregulated in buccal cancer by RNA-seq.

Sajnani MR, Patel AK, Bhatt VD, Tripathi AK, Ahir VB, Shankar V, Shah S, Shah TM, Koringa PG, Jakhesara SJ, Joshi CG.

Gene. 2012 Oct 10;507(2):152-8. doi: 10.1016/j.gene.2012.07.036. Epub 2012 Jul 27.

PMID:
22846364
14.

Characterizing the impact of smoking and lung cancer on the airway transcriptome using RNA-Seq.

Beane J, Vick J, Schembri F, Anderlind C, Gower A, Campbell J, Luo L, Zhang XH, Xiao J, Alekseyev YO, Wang S, Levy S, Massion PP, Lenburg M, Spira A.

Cancer Prev Res (Phila). 2011 Jun;4(6):803-17. doi: 10.1158/1940-6207.CAPR-11-0212.

15.

Comprehensive structural annotation of Pichia pastoris transcriptome and the response to various carbon sources using deep paired-end RNA sequencing.

Liang S, Wang B, Pan L, Ye Y, He M, Han S, Zheng S, Wang X, Lin Y.

BMC Genomics. 2012 Dec 31;13:738. doi: 10.1186/1471-2164-13-738.

16.

A garter snake transcriptome: pyrosequencing, de novo assembly, and sex-specific differences.

Schwartz TS, Tae H, Yang Y, Mockaitis K, Van Hemert JL, Proulx SR, Choi JH, Bronikowski AM.

BMC Genomics. 2010 Dec 7;11:694. doi: 10.1186/1471-2164-11-694.

17.

Massive parallel sequencing of mRNA in identification of unannotated salinity stress-inducible transcripts in rice (Oryza sativa L.).

Mizuno H, Kawahara Y, Sakai H, Kanamori H, Wakimoto H, Yamagata H, Oono Y, Wu J, Ikawa H, Itoh T, Matsumoto T.

BMC Genomics. 2010 Dec 2;11:683. doi: 10.1186/1471-2164-11-683.

18.

Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds.

Shi CY, Yang H, Wei CL, Yu O, Zhang ZZ, Jiang CJ, Sun J, Li YY, Chen Q, Xia T, Wan XC.

BMC Genomics. 2011 Feb 28;12:131. doi: 10.1186/1471-2164-12-131.

19.

Transcriptome analysis of the silkworm (Bombyx mori) by high-throughput RNA sequencing.

Li Y, Wang G, Tian J, Liu H, Yang H, Yi Y, Wang J, Shi X, Jiang F, Yao B, Zhang Z.

PLoS One. 2012;7(8):e43713. doi: 10.1371/journal.pone.0043713. Epub 2012 Aug 23.

20.
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