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Results: 1 to 20 of 112

1.

Biclustering for the comprehensive search of correlated gene expression patterns using clustered seed expansion.

Yun T, Yi GS.

BMC Genomics. 2013 Mar 5;14:144. doi: 10.1186/1471-2164-14-144.

PMID:
23496895
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

A novel coherence measure for discovering scaling biclusters from gene expression data.

Mukhopadhyay A, Maulik U, Bandyopadhyay S.

J Bioinform Comput Biol. 2009 Oct;7(5):853-68.

PMID:
19785049
[PubMed - indexed for MEDLINE]
3.

Discovery of error-tolerant biclusters from noisy gene expression data.

Gupta R, Rao N, Kumar V.

BMC Bioinformatics. 2011 Nov 24;12 Suppl 12:S1. doi: 10.1186/1471-2105-12-S12-S1.

PMID:
22168285
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A probabilistic coevolutionary biclustering algorithm for discovering coherent patterns in gene expression dataset.

Joung JG, Kim SJ, Shin SY, Zhang BT.

BMC Bioinformatics. 2012;13 Suppl 17:S12. doi: 10.1186/1471-2105-13-S17-S12. Epub 2012 Dec 13.

PMID:
23282075
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Biclustering of microarray data with MOSPO based on crowding distance.

Liu J, Li Z, Hu X, Chen Y.

BMC Bioinformatics. 2009 Apr 29;10 Suppl 4:S9. doi: 10.1186/1471-2105-10-S4-S9.

PMID:
19426457
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Pattern-driven neighborhood search for biclustering of microarray data.

Ayadi W, Elloumi M, Hao JK.

BMC Bioinformatics. 2012 May 8;13 Suppl 7:S11. doi: 10.1186/1471-2105-13-S7-S11.

PMID:
22594997
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

WF-MSB: a weighted fuzzy-based biclustering method for gene expression data.

Chen LC, Yu PS, Tseng VS.

Int J Data Min Bioinform. 2011;5(1):89-109.

PMID:
21491846
[PubMed - indexed for MEDLINE]
8.

Dynamic biclustering of microarray data by multi-objective immune optimization.

Liu J, Li Z, Hu X, Chen Y, Park EK.

BMC Genomics. 2011;12 Suppl 2:S11. doi: 10.1186/1471-2164-12-S2-S11. Epub 2011 Jul 27.

PMID:
21989068
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Parallelized evolutionary learning for detection of biclusters in gene expression data.

Huang Q, Tao D, Li X, Liew AW.

IEEE/ACM Trans Comput Biol Bioinform. 2012;9(2):560-70. doi: 10.1109/TCBB.2011.53. Epub 2011 Mar 3.

PMID:
21383419
[PubMed - indexed for MEDLINE]
10.

KMeans greedy search hybrid algorithm for biclustering gene expression data.

Das S, Idicula SM.

Adv Exp Med Biol. 2010;680:181-8. doi: 10.1007/978-1-4419-5913-3_21.

PMID:
20865500
[PubMed - indexed for MEDLINE]
11.

Discovering coherent biclusters from gene expression data using zero-suppressed binary decision diagrams.

Yoon S, Nardini C, Benini L, De Micheli G.

IEEE/ACM Trans Comput Biol Bioinform. 2005 Oct-Dec;2(4):339-54.

PMID:
17044171
[PubMed - indexed for MEDLINE]
12.

Biclustering via optimal re-ordering of data matrices in systems biology: rigorous methods and comparative studies.

DiMaggio PA Jr, McAllister SR, Floudas CA, Feng XJ, Rabinowitz JD, Rabitz HA.

BMC Bioinformatics. 2008 Oct 27;9:458. doi: 10.1186/1471-2105-9-458.

PMID:
18954459
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Biclustering algorithms for biological data analysis: a survey.

Madeira SC, Oliveira AL.

IEEE/ACM Trans Comput Biol Bioinform. 2004 Jan-Mar;1(1):24-45.

PMID:
17048406
[PubMed - indexed for MEDLINE]
14.

Robust biclustering by sparse singular value decomposition incorporating stability selection.

Sill M, Kaiser S, Benner A, Kopp-Schneider A.

Bioinformatics. 2011 Aug 1;27(15):2089-97. doi: 10.1093/bioinformatics/btr322. Epub 2011 Jun 2.

PMID:
21636597
[PubMed - indexed for MEDLINE]
Free Article
15.

Possibilistic approach for biclustering microarray data.

Cano C, Adarve L, López J, Blanco A.

Comput Biol Med. 2007 Oct;37(10):1426-36. Epub 2007 Mar 8.

PMID:
17346690
[PubMed - indexed for MEDLINE]
16.

A graph spectrum based geometric biclustering algorithm.

Wang DZ, Yan H.

J Theor Biol. 2013 Jan 21;317:200-11. doi: 10.1016/j.jtbi.2012.10.012. Epub 2012 Oct 16.

PMID:
23079285
[PubMed - indexed for MEDLINE]
17.

A general framework for biclustering gene expression data.

Li H, Chen X, Zhang K, Jiang T.

J Bioinform Comput Biol. 2006 Aug;4(4):911-33.

PMID:
17007074
[PubMed - indexed for MEDLINE]
18.

Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate visualization.

Cheng KO, Law NF, Siu WC, Liew AW.

BMC Bioinformatics. 2008 Apr 23;9:210. doi: 10.1186/1471-2105-9-210.

PMID:
18433478
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Biclustering of gene expression data by correlation-based scatter search.

Nepomuceno JA, Troncoso A, Aguilar-Ruiz JS.

BioData Min. 2011 Jan 24;4(1):3. doi: 10.1186/1756-0381-4-3.

PMID:
21261986
[PubMed]
Free PMC Article
20.

Biclustering of gene expression data using reactive greedy randomized adaptive search procedure.

Dharan S, Nair AS.

BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S27. doi: 10.1186/1471-2105-10-S1-S27.

PMID:
19208127
[PubMed - indexed for MEDLINE]
Free PMC Article

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