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Items: 1 to 20 of 161

1.

Genomic distribution of maize facultative heterochromatin marked by trimethylation of H3K27.

Makarevitch I, Eichten SR, Briskine R, Waters AJ, Danilevskaya ON, Meeley RB, Myers CL, Vaughn MW, Springer NM.

Plant Cell. 2013 Mar;25(3):780-93. doi: 10.1105/tpc.112.106427. Epub 2013 Mar 5.

2.

Genome-wide high resolution parental-specific DNA and histone methylation maps uncover patterns of imprinting regulation in maize.

Zhang M, Xie S, Dong X, Zhao X, Zeng B, Chen J, Li H, Yang W, Zhao H, Wang G, Chen Z, Sun S, Hauck A, Jin W, Lai J.

Genome Res. 2014 Jan;24(1):167-76. doi: 10.1101/gr.155879.113. Epub 2013 Oct 16.

3.

Parent-of-origin effects on gene expression and DNA methylation in the maize endosperm.

Waters AJ, Makarevitch I, Eichten SR, Swanson-Wagner RA, Yeh CT, Xu W, Schnable PS, Vaughn MW, Gehring M, Springer NM.

Plant Cell. 2011 Dec;23(12):4221-33. doi: 10.1105/tpc.111.092668. Epub 2011 Dec 23.

4.

Identification and characterization of an epi-allele of FIE1 reveals a regulatory linkage between two epigenetic marks in rice.

Zhang L, Cheng Z, Qin R, Qiu Y, Wang JL, Cui X, Gu L, Zhang X, Guo X, Wang D, Jiang L, Wu CY, Wang H, Cao X, Wan J.

Plant Cell. 2012 Nov;24(11):4407-21. doi: 10.1105/tpc.112.102269. Epub 2012 Nov 13.

5.

Identification and characterization of the SET domain gene family in maize.

Qian Y, Xi Y, Cheng B, Zhu S, Kan X.

Mol Biol Rep. 2014 Mar;41(3):1341-54. doi: 10.1007/s11033-013-2980-x. Epub 2014 Jan 4.

PMID:
24390243
6.

Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize.

Xing H, Pudake RN, Guo G, Xing G, Hu Z, Zhang Y, Sun Q, Ni Z.

BMC Genomics. 2011 Apr 7;12:178. doi: 10.1186/1471-2164-12-178.

7.

Imprinted expression of genes and small RNA is associated with localized hypomethylation of the maternal genome in rice endosperm.

Rodrigues JA, Ruan R, Nishimura T, Sharma MK, Sharma R, Ronald PC, Fischer RL, Zilberman D.

Proc Natl Acad Sci U S A. 2013 May 7;110(19):7934-9. doi: 10.1073/pnas.1306164110. Epub 2013 Apr 23.

8.

Analysis of rice Snf2 family proteins and their potential roles in epigenetic regulation.

Hu Y, Zhu N, Wang X, Yi Q, Zhu D, Lai Y, Zhao Y.

Plant Physiol Biochem. 2013 Sep;70:33-42. doi: 10.1016/j.plaphy.2013.05.001. Epub 2013 May 17.

PMID:
23770592
9.

Genomic imprinting: insights from plants.

Gehring M.

Annu Rev Genet. 2013;47:187-208. doi: 10.1146/annurev-genet-110711-155527. Epub 2013 Aug 30. Review.

PMID:
24016190
10.

Dynamic expression of imprinted genes associates with maternally controlled nutrient allocation during maize endosperm development.

Xin M, Yang R, Li G, Chen H, Laurie J, Ma C, Wang D, Yao Y, Larkins BA, Sun Q, Yadegari R, Wang X, Ni Z.

Plant Cell. 2013 Sep;25(9):3212-27. doi: 10.1105/tpc.113.115592. Epub 2013 Sep 20.

11.

Comprehensive analysis of imprinted genes in maize reveals allelic variation for imprinting and limited conservation with other species.

Waters AJ, Bilinski P, Eichten SR, Vaughn MW, Ross-Ibarra J, Gehring M, Springer NM.

Proc Natl Acad Sci U S A. 2013 Nov 26;110(48):19639-44. doi: 10.1073/pnas.1309182110. Epub 2013 Nov 11.

12.

Genomic imprinting, methylation and molecular evolution of maize Enhancer of zeste (Mez) homologs.

Haun WJ, Laoueillé-Duprat S, O'connell MJ, Spillane C, Grossniklaus U, Phillips AR, Kaeppler SM, Springer NM.

Plant J. 2007 Jan;49(2):325-37. Epub 2006 Dec 20.

13.

H3K27me3 profiling of the endosperm implies exclusion of polycomb group protein targeting by DNA methylation.

Weinhofer I, Hehenberger E, Roszak P, Hennig L, Köhler C.

PLoS Genet. 2010 Oct 7;6(10). pii: e1001152. doi: 10.1371/journal.pgen.1001152.

14.

Genome-wide high-resolution mapping of DNA methylation identifies epigenetic variation across embryo and endosperm in Maize (Zea may).

Wang P, Xia H, Zhang Y, Zhao S, Zhao C, Hou L, Li C, Li A, Ma C, Wang X.

BMC Genomics. 2015 Jan 23;16:21. doi: 10.1186/s12864-014-1204-7.

15.

A genomic and expression compendium of the expanded PEBP gene family from maize.

Danilevskaya ON, Meng X, Hou Z, Ananiev EV, Simmons CR.

Plant Physiol. 2008 Jan;146(1):250-64. Epub 2007 Nov 9.

16.

Genomic distribution of H3K9me2 and DNA methylation in a maize genome.

West PT, Li Q, Ji L, Eichten SR, Song J, Vaughn MW, Schmitz RJ, Springer NM.

PLoS One. 2014 Aug 14;9(8):e105267. doi: 10.1371/journal.pone.0105267. eCollection 2014.

17.

Maternal and paternal alleles exhibit differential histone methylation and acetylation at maize imprinted genes.

Haun WJ, Springer NM.

Plant J. 2008 Dec;56(6):903-12. doi: 10.1111/j.1365-313X.2008.03649.x. Epub 2008 Sep 5.

18.

Contribution of the epigenetic mark H3K27me3 to functional divergence after whole genome duplication in Arabidopsis.

Berke L, Sanchez-Perez GF, Snel B.

Genome Biol. 2012 Oct 3;13(10):R94. doi: 10.1186/gb-2012-13-10-r94.

19.

Extensive, clustered parental imprinting of protein-coding and noncoding RNAs in developing maize endosperm.

Zhang M, Zhao H, Xie S, Chen J, Xu Y, Wang K, Zhao H, Guan H, Hu X, Jiao Y, Song W, Lai J.

Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):20042-7. doi: 10.1073/pnas.1112186108. Epub 2011 Nov 23.

20.

Comparative genomic analysis of the Sm gene family in rice and maize.

Chen Y, Cao J.

Gene. 2014 Apr 15;539(2):238-49. doi: 10.1016/j.gene.2014.02.006. Epub 2014 Feb 11.

PMID:
24525402
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