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Results: 1 to 20 of 159

1.

X-ray crystal structure of Escherichia coli RNA polymerase σ70 holoenzyme.

Murakami KS.

J Biol Chem. 2013 Mar 29;288(13):9126-34. doi: 10.1074/jbc.M112.430900. Epub 2013 Feb 6.

PMID:
23389035
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Interaction of Escherichia coli RNA polymerase σ70 subunit with promoter elements in the context of free σ70, RNA polymerase holoenzyme, and the β'-σ70 complex.

Mekler V, Pavlova O, Severinov K.

J Biol Chem. 2011 Jan 7;286(1):270-9. doi: 10.1074/jbc.M110.174102. Epub 2010 Oct 15.

PMID:
20952386
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution.

Vassylyev DG, Sekine S, Laptenko O, Lee J, Vassylyeva MN, Borukhov S, Yokoyama S.

Nature. 2002 Jun 13;417(6890):712-9. Epub 2002 May 8.

PMID:
12000971
[PubMed - indexed for MEDLINE]
4.

Minimal machinery of RNA polymerase holoenzyme sufficient for promoter melting.

Young BA, Gruber TM, Gross CA.

Science. 2004 Feb 27;303(5662):1382-4.

PMID:
14988563
[PubMed - indexed for MEDLINE]
Free Article
5.

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex.

Murakami KS, Masuda S, Campbell EA, Muzzin O, Darst SA.

Science. 2002 May 17;296(5571):1285-90.

PMID:
12016307
[PubMed - indexed for MEDLINE]
Free Article
6.

Phage T7 Gp2 inhibition of Escherichia coli RNA polymerase involves misappropriation of σ70 domain 1.1.

Bae B, Davis E, Brown D, Campbell EA, Wigneshweraraj S, Darst SA.

Proc Natl Acad Sci U S A. 2013 Dec 3;110(49):19772-7. doi: 10.1073/pnas.1314576110. Epub 2013 Nov 11.

PMID:
24218560
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The interaction between sigma70 and the beta-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation.

Nickels BE, Garrity SJ, Mekler V, Minakhin L, Severinov K, Ebright RH, Hochschild A.

Proc Natl Acad Sci U S A. 2005 Mar 22;102(12):4488-93. Epub 2005 Mar 10.

PMID:
15761057
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

A mutation in region 1.1 of sigma70 affects promoter DNA binding by Escherichia coli RNA polymerase holoenzyme.

Bowers CW, Dombroski AJ.

EMBO J. 1999 Feb 1;18(3):709-16.

PMID:
9927430
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution.

Murakami KS, Masuda S, Darst SA.

Science. 2002 May 17;296(5571):1280-4.

PMID:
12016306
[PubMed - indexed for MEDLINE]
Free Article
10.

Domain 1.1 of the sigma(70) subunit of Escherichia coli RNA polymerase modulates the formation of stable polymerase/promoter complexes.

Vuthoori S, Bowers CW, McCracken A, Dombroski AJ, Hinton DM.

J Mol Biol. 2001 Jun 8;309(3):561-72.

PMID:
11397080
[PubMed - indexed for MEDLINE]
11.
12.

Beta subunit residues 186-433 and 436-445 are commonly used by Esigma54 and Esigma70 RNA polymerase for open promoter complex formation.

Wigneshweraraj SR, Nechaev S, Severinov K, Buck M.

J Mol Biol. 2002 Jun 21;319(5):1067-83.

PMID:
12079348
[PubMed - indexed for MEDLINE]
13.

The role of the lid element in transcription by E. coli RNA polymerase.

Toulokhonov I, Landick R.

J Mol Biol. 2006 Aug 25;361(4):644-58. Epub 2006 Jul 27.

PMID:
16876197
[PubMed - indexed for MEDLINE]
14.

Characteristics of σ-dependent pausing by RNA polymerases from Escherichia coli and Thermus aquaticus.

Zhilina EV, Miropolskaya NA, Bass IA, Brodolin KL, Kulbachinskiy AV.

Biochemistry (Mosc). 2011 Oct;76(10):1098-106. doi: 10.1134/S0006297911100038.

PMID:
22098235
[PubMed - indexed for MEDLINE]
Free Article
15.

RNA polymerase-promoter interactions determining different stability of the Escherichia coli and Thermus aquaticus transcription initiation complexes.

Mekler V, Minakhin L, Kuznedelov K, Mukhamedyarov D, Severinov K.

Nucleic Acids Res. 2012 Dec;40(22):11352-62. doi: 10.1093/nar/gks973. Epub 2012 Oct 18.

PMID:
23087380
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Isolation and characterization of mutations in region 1.2 of Escherichia coli sigma70.

Baldwin NE, Dombroski AJ.

Mol Microbiol. 2001 Oct;42(2):427-37.

PMID:
11703665
[PubMed - indexed for MEDLINE]
17.

The effect of the DNA conformation on the rate of NtrC activated transcription of Escherichia coli RNA polymerase.sigma(54) holoenzyme.

Schulz A, Langowski J, Rippe K.

J Mol Biol. 2000 Jul 21;300(4):709-25.

PMID:
10891265
[PubMed - indexed for MEDLINE]
18.

Stable DNA opening within open promoter complexes is mediated by the RNA polymerase beta'-jaw domain.

Wigneshweraraj SR, Burrows PC, Severinov K, Buck M.

J Biol Chem. 2005 Oct 28;280(43):36176-84. Epub 2005 Aug 24.

PMID:
16123036
[PubMed - indexed for MEDLINE]
Free Article
19.

Bacterial RNA polymerases: the wholo story.

Murakami KS, Darst SA.

Curr Opin Struct Biol. 2003 Feb;13(1):31-9. Review.

PMID:
12581657
[PubMed - indexed for MEDLINE]
20.

Mapping the spatial neighborhood of the regulatory 6S RNA bound to Escherichia coli RNA polymerase holoenzyme.

Steuten B, Setny P, Zacharias M, Wagner R.

J Mol Biol. 2013 Oct 9;425(19):3649-61. doi: 10.1016/j.jmb.2013.07.008. Epub 2013 Jul 15.

PMID:
23867276
[PubMed - indexed for MEDLINE]

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