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Results: 1 to 20 of 100

1.

Convergent gene loss following gene and genome duplications creates single-copy families in flowering plants.

De Smet R, Adams KL, Vandepoele K, Van Montagu MC, Maere S, Van de Peer Y.

Proc Natl Acad Sci U S A. 2013 Feb 19;110(8):2898-903. doi: 10.1073/pnas.1300127110. Epub 2013 Feb 4.

PMID:
23382190
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryza and their phylogenetic utility across various taxonomic levels.

Duarte JM, Wall PK, Edger PP, Landherr LL, Ma H, Pires JC, Leebens-Mack J, dePamphilis CW.

BMC Evol Biol. 2010 Feb 24;10:61. doi: 10.1186/1471-2148-10-61.

PMID:
20181251
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genome and gene duplications and gene expression divergence: a view from plants.

Wang Y, Wang X, Paterson AH.

Ann N Y Acad Sci. 2012 May;1256:1-14. doi: 10.1111/j.1749-6632.2011.06384.x. Epub 2012 Jan 18. Review.

PMID:
22257007
[PubMed - indexed for MEDLINE]
4.

Selection for higher gene copy number after different types of plant gene duplications.

Hudson CM, Puckett EE, Bekaert M, Pires JC, Conant GC.

Genome Biol Evol. 2011;3:1369-80. doi: 10.1093/gbe/evr115. Epub 2011 Nov 4.

PMID:
22056313
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Dating and functional characterization of duplicated genes in the apple (Malus domestica Borkh.) by analyzing EST data.

Sanzol J.

BMC Plant Biol. 2010 May 14;10:87. doi: 10.1186/1471-2229-10-87.

PMID:
20470375
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Modes of gene duplication contribute differently to genetic novelty and redundancy, but show parallels across divergent angiosperms.

Wang Y, Wang X, Tang H, Tan X, Ficklin SP, Feltus FA, Paterson AH.

PLoS One. 2011;6(12):e28150. doi: 10.1371/journal.pone.0028150. Epub 2011 Dec 2.

PMID:
22164235
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events.

Bowers JE, Chapman BA, Rong J, Paterson AH.

Nature. 2003 Mar 27;422(6930):433-8.

PMID:
12660784
[PubMed - indexed for MEDLINE]
8.

The flowering world: a tale of duplications.

Van de Peer Y, Fawcett JA, Proost S, Sterck L, Vandepoele K.

Trends Plant Sci. 2009 Dec;14(12):680-8. doi: 10.1016/j.tplants.2009.09.001. Epub 2009 Oct 7. Review.

PMID:
19818673
[PubMed - indexed for MEDLINE]
9.

Modeling gene and genome duplications in eukaryotes.

Maere S, De Bodt S, Raes J, Casneuf T, Van Montagu M, Kuiper M, Van de Peer Y.

Proc Natl Acad Sci U S A. 2005 Apr 12;102(15):5454-9. Epub 2005 Mar 30.

PMID:
15800040
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana.

Casneuf T, De Bodt S, Raes J, Maere S, Van de Peer Y.

Genome Biol. 2006;7(2):R13. Epub 2006 Feb 20.

PMID:
16507168
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Unique genes in plants: specificities and conserved features throughout evolution.

Armisén D, Lecharny A, Aubourg S.

BMC Evol Biol. 2008 Oct 10;8:280. doi: 10.1186/1471-2148-8-280.

PMID:
18847470
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The origins of genomic duplications in Arabidopsis.

Vision TJ, Brown DG, Tanksley SD.

Science. 2000 Dec 15;290(5499):2114-7.

PMID:
11118139
[PubMed - indexed for MEDLINE]
Free Article
13.

Genome duplication and gene-family evolution: the case of three OXPHOS gene families.

De Grassi A, Lanave C, Saccone C.

Gene. 2008 Sep 15;421(1-2):1-6. doi: 10.1016/j.gene.2008.05.011. Epub 2008 Jun 23. Review.

PMID:
18573316
[PubMed - indexed for MEDLINE]
14.

Inferring angiosperm phylogeny from EST data with widespread gene duplication.

Sanderson MJ, McMahon MM.

BMC Evol Biol. 2007 Feb 8;7 Suppl 1:S3.

PMID:
17288576
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Widespread genome duplications throughout the history of flowering plants.

Cui L, Wall PK, Leebens-Mack JH, Lindsay BG, Soltis DE, Doyle JJ, Soltis PS, Carlson JE, Arumuganathan K, Barakat A, Albert VA, Ma H, dePamphilis CW.

Genome Res. 2006 Jun;16(6):738-49. Epub 2006 May 15.

PMID:
16702410
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Escape from preferential retention following repeated whole genome duplications in plants.

Schnable JC, Wang X, Pires JC, Freeling M.

Front Plant Sci. 2012 May 15;3:94. doi: 10.3389/fpls.2012.00094. eCollection 2012.

PMID:
22639677
[PubMed]
Free PMC Article
17.

Intron loss and gain during evolution of the catalase gene family in angiosperms.

Frugoli JA, McPeek MA, Thomas TL, McClung CR.

Genetics. 1998 May;149(1):355-65.

PMID:
9584109
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

PGDD: a database of gene and genome duplication in plants.

Lee TH, Tang H, Wang X, Paterson AH.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1152-8. doi: 10.1093/nar/gks1104. Epub 2012 Nov 24.

PMID:
23180799
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli.

Hanada K, Zou C, Lehti-Shiu MD, Shinozaki K, Shiu SH.

Plant Physiol. 2008 Oct;148(2):993-1003. doi: 10.1104/pp.108.122457. Epub 2008 Aug 20.

PMID:
18715958
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes.

Edger PP, Pires JC.

Chromosome Res. 2009;17(5):699-717. doi: 10.1007/s10577-009-9055-9. Review.

PMID:
19802709
[PubMed - indexed for MEDLINE]

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