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Selection of heptapeptides that bind helix 69 of bacterial 23S ribosomal RNA.

Kaur M, Rupasinghe CN, Klosi E, Spaller MR, Chow CS.

Bioorg Med Chem. 2013 Mar 1;21(5):1240-7. doi: 10.1016/j.bmc.2012.12.048. Epub 2013 Jan 10.


pH-dependent structural changes of helix 69 from Escherichia coli 23S ribosomal RNA.

Abeysirigunawardena SC, Chow CS.

RNA. 2008 Apr;14(4):782-92. doi: 10.1261/rna.779908. Epub 2008 Feb 11.


Selection of peptides that target the aminoacyl-tRNA site of bacterial 16S ribosomal RNA.

Li M, Duc AC, Klosi E, Pattabiraman S, Spaller MR, Chow CS.

Biochemistry. 2009 Sep 8;48(35):8299-311. doi: 10.1021/bi900982t.


Binding of aminoglycoside antibiotics to helix 69 of 23S rRNA.

Scheunemann AE, Graham WD, Vendeix FA, Agris PF.

Nucleic Acids Res. 2010 May;38(9):3094-105. doi: 10.1093/nar/gkp1253. Epub 2010 Jan 27.


The structure of helix 89 of 23S rRNA is important for peptidyl transferase function of Escherichia coli ribosome.

Burakovsky DE, Sergiev PV, Steblyanko MA, Konevega AL, Bogdanov AA, Dontsova OA.

FEBS Lett. 2011 Oct 3;585(19):3073-8. doi: 10.1016/j.febslet.2011.08.030. Epub 2011 Aug 27.


Conserved loop sequence of helix 69 in Escherichia coli 23 S rRNA is involved in A-site tRNA binding and translational fidelity.

Hirabayashi N, Sato NS, Suzuki T.

J Biol Chem. 2006 Jun 23;281(25):17203-11. Epub 2006 Apr 18.


Ribosomal intersubunit bridge B2a is involved in factor-dependent translation initiation and translational processivity.

Kipper K, Hetényi C, Sild S, Remme J, Liiv A.

J Mol Biol. 2009 Jan 16;385(2):405-22. doi: 10.1016/j.jmb.2008.10.065. Epub 2008 Nov 5.


A common motif organizes the structure of multi-helix loops in 16 S and 23 S ribosomal RNAs.

Leontis NB, Westhof E.

J Mol Biol. 1998 Oct 30;283(3):571-83.


Antibiotic interactions at the GTPase-associated centre within Escherichia coli 23S rRNA.

Egebjerg J, Douthwaite S, Garrett RA.

EMBO J. 1989 Feb;8(2):607-11.


Pseudouridylation of 23S rRNA helix 69 promotes peptide release by release factor RF2 but not by release factor RF1.

Kipper K, Sild S, Hetényi C, Remme J, Liiv A.

Biochimie. 2011 May;93(5):834-44. doi: 10.1016/j.biochi.2010.12.018. Epub 2011 Jan 31.


Identification of a structural motif of 23S rRNA interacting with 5S rRNA.

Ko J, Lee Y, Park I, Cho B.

FEBS Lett. 2001 Nov 23;508(3):300-4.


Decreased requirement for 4.5S RNA in 16S and 23S rRNA mutants of Escherichia coli.

Brunelli CA, O'Connor M, Dahlberg AE.

FEBS Lett. 2002 Mar 6;514(1):44-8.


Selection of peptides targeting helix 31 of bacterial 16S ribosomal RNA by screening M13 phage-display libraries.

Lamichhane TN, Abeydeera ND, Duc AC, Cunningham PR, Chow CS.

Molecules. 2011 Jan 28;16(2):1211-39. doi: 10.3390/molecules16021211.


Double molecular mimicry in Escherichia coli: binding of ribosomal protein L20 to its two sites in mRNA is similar to its binding to 23S rRNA.

Guillier M, Allemand F, Dardel F, Royer CA, Springer M, Chiaruttini C.

Mol Microbiol. 2005 Jun;56(6):1441-56.


Identification of molecular interactions between P-site tRNA and the ribosome essential for translocation.

Feinberg JS, Joseph S.

Proc Natl Acad Sci U S A. 2001 Sep 25;98(20):11120-5. Epub 2001 Sep 18.

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