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Items: 1 to 20 of 105

1.

A multispecies polyadenylation site model.

Ho ES, Gunderson SI, Duffy S.

BMC Bioinformatics. 2013;14 Suppl 2:S9. doi: 10.1186/1471-2105-14-S2-S9. Epub 2013 Jan 21.

2.

Prediction of mRNA polyadenylation sites by support vector machine.

Cheng Y, Miura RM, Tian B.

Bioinformatics. 2006 Oct 1;22(19):2320-5. Epub 2006 Jul 26.

3.
4.

In silico prediction of mRNA poly(A) sites in Chlamydomonas reinhardtii.

Wu X, Ji G, Zeng Y.

Mol Genet Genomics. 2012 Dec;287(11-12):895-907. doi: 10.1007/s00438-012-0725-5. Epub 2012 Oct 30.

PMID:
23108961
5.
6.

Similarities and differences of polyadenylation signals in human and fly.

Retelska D, Iseli C, Bucher P, Jongeneel CV, Naef F.

BMC Genomics. 2006 Jul 12;7:176.

7.

RNA polyadenylation sites on the genomes of microorganisms, animals, and plants.

Li XQ, Du D.

PLoS One. 2013 Nov 18;8(11):e79511. doi: 10.1371/journal.pone.0079511. eCollection 2013.

8.

Prediction of plant mRNA polyadenylation sites.

Wu X, Ji G, Li QQ.

Methods Mol Biol. 2015;1255:13-23. doi: 10.1007/978-1-4939-2175-1_2.

PMID:
25487200
9.

Conservation of alternative polyadenylation patterns in mammalian genes.

Ara T, Lopez F, Ritchie W, Benech P, Gautheret D.

BMC Genomics. 2006 Jul 26;7:189.

10.

Sequence determinants in human polyadenylation site selection.

Legendre M, Gautheret D.

BMC Genomics. 2003 Feb 25;4(1):7.

11.

Predictive modeling of plant messenger RNA polyadenylation sites.

Ji G, Zheng J, Shen Y, Wu X, Jiang R, Lin Y, Loke JC, Davis KM, Reese GJ, Li QQ.

BMC Bioinformatics. 2007 Feb 7;8:43.

12.

Characterization and prediction of mRNA alternative polyadenylation sites in rice genes.

Wu X, Zhao C, Su Y.

Biomed Mater Eng. 2014;24(6):3779-85. doi: 10.3233/BME-141207.

PMID:
25227094
13.

Poly(A) motif prediction using spectral latent features from human DNA sequences.

Xie B, Jankovic BR, Bajic VB, Song L, Gao X.

Bioinformatics. 2013 Jul 1;29(13):i316-25. doi: 10.1093/bioinformatics/btt218.

14.

Epigenomic and RNA structural correlates of polyadenylation.

Khaladkar M, Smyda M, Hannenhalli S.

RNA Biol. 2011 May-Jun;8(3):529-37. Epub 2011 May 1.

15.

A classification-based prediction model of messenger RNA polyadenylation sites.

Ji G, Wu X, Shen Y, Huang J, Quinn Li Q.

J Theor Biol. 2010 Aug 7;265(3):287-96. doi: 10.1016/j.jtbi.2010.05.015. Epub 2010 May 26.

PMID:
20546757
16.

Bioinformatic identification of candidate cis-regulatory elements involved in human mRNA polyadenylation.

Hu J, Lutz CS, Wilusz J, Tian B.

RNA. 2005 Oct;11(10):1485-93. Epub 2005 Aug 30.

17.
18.

An improved poly(A) motifs recognition method based on decision level fusion.

Zhang S, Han J, Liu J, Zheng J, Liu R.

Comput Biol Chem. 2015 Feb;54:49-56. doi: 10.1016/j.compbiolchem.2014.12.001. Epub 2014 Dec 30.

PMID:
25594576
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