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Items: 1 to 20 of 105

1.

An architecture for integrating cancer model repositories.

Sfakianakis S, Sakkalis V, Marias K, Stamatakos G, McKeever S, Deisboeck TS, Graf N.

Conf Proc IEEE Eng Med Biol Soc. 2012;2012:6628-31. doi: 10.1109/EMBC.2012.6347514.

PMID:
23367449
2.

caCORE version 3: Implementation of a model driven, service-oriented architecture for semantic interoperability.

Komatsoulis GA, Warzel DB, Hartel FW, Shanbhag K, Chilukuri R, Fragoso G, Coronado Sd, Reeves DM, Hadfield JB, Ludet C, Covitz PA.

J Biomed Inform. 2008 Feb;41(1):106-23. Epub 2007 Apr 2.

3.

caGrid: design and implementation of the core architecture of the cancer biomedical informatics grid.

Saltz J, Oster S, Hastings S, Langella S, Kurc T, Sanchez W, Kher M, Manisundaram A, Shanbhag K, Covitz P.

Bioinformatics. 2006 Aug 1;22(15):1910-6. Epub 2006 Jun 9.

4.

Interoperability with Moby 1.0--it's better than sharing your toothbrush!

BioMoby Consortium, Wilkinson MD, Senger M, Kawas E, Bruskiewich R, Gouzy J, Noirot C, Bardou P, Ng A, Haase D, Saiz Ede A, Wang D, Gibbons F, Gordon PM, Sensen CW, Carrasco JM, Fernández JM, Shen L, Links M, Ng M, Opushneva N, Neerincx PB, Leunissen JA, Ernst R, Twigger S, Usadel B, Good B, Wong Y, Stein L, Crosby W, Karlsson J, Royo R, Párraga I, Ramírez S, Gelpi JL, Trelles O, Pisano DG, Jimenez N, Kerhornou A, Rosset R, Zamacola L, Tarraga J, Huerta-Cepas J, Carazo JM, Dopazo J, Guigo R, Navarro A, Orozco M, Valencia A, Claros MG, Pérez AJ, Aldana J, Rojano M, Fernandez-Santa Cruz R, Navas I, Schiltz G, Farmer A, Gessler D, Schoof H, Groscurth A.

Brief Bioinform. 2008 May;9(3):220-31. doi: 10.1093/bib/bbn003. Epub 2008 Jan 31. Review.

5.

The caCORE Software Development Kit: streamlining construction of interoperable biomedical information services.

Phillips J, Chilukuri R, Fragoso G, Warzel D, Covitz PA.

BMC Med Inform Decis Mak. 2006 Jan 6;6:2.

6.
7.

caGrid 1.0: an enterprise Grid infrastructure for biomedical research.

Oster S, Langella S, Hastings S, Ervin D, Madduri R, Phillips J, Kurc T, Siebenlist F, Covitz P, Shanbhag K, Foster I, Saltz J.

J Am Med Inform Assoc. 2008 Mar-Apr;15(2):138-49. Epub 2007 Dec 20.

8.

Integration of the Gene Ontology into an object-oriented architecture.

Shegogue D, Zheng WJ.

BMC Bioinformatics. 2005 May 10;6:113.

9.

Semantic web data warehousing for caGrid.

McCusker JP, Phillips JA, González Beltrán A, Finkelstein A, Krauthammer M.

BMC Bioinformatics. 2009 Oct 1;10 Suppl 10:S2. doi: 10.1186/1471-2105-10-S10-S2.

10.

Towards a Grid infrastructure to support integrative approaches to biological research.

Gavaghan DJ, Simpson AC, Lloyd S, Mac Randal DF, Boyd DR.

Philos Trans A Math Phys Eng Sci. 2005 Aug 15;363(1833):1829-41.

11.

Interoperability driven integration of biomedical data sources.

Teodoro D, Choquet R, Schober D, Mels G, Pasche E, Ruch P, Lovis C.

Stud Health Technol Inform. 2011;169:185-9.

PMID:
21893739
12.

Metadata mapping and reuse in caBIG.

Kunz I, Lin MC, Frey L.

BMC Bioinformatics. 2009 Feb 5;10 Suppl 2:S4. doi: 10.1186/1471-2105-10-S2-S4.

13.

Mediator infrastructure for information integration and semantic data integration environment for biomedical research.

Grethe JS, Ross E, Little D, Sanders B, Gupta A, Astakhov V.

Methods Mol Biol. 2009;569:33-53. doi: 10.1007/978-1-59745-524-4_3.

PMID:
19623485
14.

Large scale healthcare data integration and analysis using the semantic web.

Timm J, Renly S, Farkash A.

Stud Health Technol Inform. 2011;169:729-33.

PMID:
21893843
15.

Information integration in molecular bioscience.

Garcia Castro A, Chen YP, Ragan MA.

Appl Bioinformatics. 2005;4(3):157-73. Review.

PMID:
16231958
16.

Architectural approaches for HL7-based health information systems implementation.

López DM, Blobel B.

Methods Inf Med. 2010;49(2):196-204. doi: 10.3414/ME09-02-0012. Epub 2010 Mar 8.

PMID:
20213040
17.

Processing SPARQL queries with regular expressions in RDF databases.

Lee J, Pham MD, Lee J, Han WS, Cho H, Yu H, Lee JH.

BMC Bioinformatics. 2011 Mar 29;12 Suppl 2:S6. doi: 10.1186/1471-2105-12-S2-S6.

18.

Integrating medical applications in an open architecture through generic and reusable components.

Xu Y, D'Alessio L, Jaulent MC, Sauquet D, Spahni S, Degoulet P.

Stud Health Technol Inform. 2001;84(Pt 1):63-7.

PMID:
11604707
19.

TumorML: Concept and requirements of an in silico cancer modelling markup language.

Johnson D, Cooper J, McKeever S.

Conf Proc IEEE Eng Med Biol Soc. 2011;2011:441-4. doi: 10.1109/IEMBS.2011.6090060.

PMID:
22254343
20.

Semantic Web Service provision: a realistic framework for Bioinformatics programmers.

Gordon PM, Trinh Q, Sensen CW.

Bioinformatics. 2007 May 1;23(9):1178-80. Epub 2007 Mar 24.

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