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Results: 1 to 20 of 103

1.

Purification and use of E. coli peptide deformylase for peptide deprotection in chemoenzymatic peptide synthesis.

Di Toma C, Sonke T, Quaedflieg PJ, Volker Wagner AF, Janssen DB.

Protein Expr Purif. 2013 May;89(1):73-9. doi: 10.1016/j.pep.2013.01.004. Epub 2013 Jan 26. Erratum in: Protein Expr Purif. 2013 Aug;90(2):141. Volker Wagner, A F [added].

PMID:
23357810
[PubMed - indexed for MEDLINE]
2.

Characterization of a human peptide deformylase: implications for antibacterial drug design.

Nguyen KT, Hu X, Colton C, Chakrabarti R, Zhu MX, Pei D.

Biochemistry. 2003 Aug 26;42(33):9952-8.

PMID:
12924944
[PubMed - indexed for MEDLINE]
3.

Expression, purification, and activity assay of peptide deformylase from Escherichia coli and Staphylococcus aureus.

Che X, Hu J, Wang L, Zhu Z, Xu Q, Lv J, Fu Z, Sun Y, Sun J, Lin G, Lu R, Yao Z.

Mol Cell Biochem. 2011 Nov;357(1-2):47-54. doi: 10.1007/s11010-011-0874-6. Epub 2011 May 21.

PMID:
21603885
[PubMed - indexed for MEDLINE]
4.

A peptide deformylase-ribosome complex reveals mechanism of nascent chain processing.

Bingel-Erlenmeyer R, Kohler R, Kramer G, Sandikci A, Antolić S, Maier T, Schaffitzel C, Wiedmann B, Bukau B, Ban N.

Nature. 2008 Mar 6;452(7183):108-11. doi: 10.1038/nature06683. Epub 2008 Feb 20.

PMID:
18288106
[PubMed - indexed for MEDLINE]
5.

Peptide deformylase as an antibacterial drug target: assays for detection of its inhibition in Escherichia coli cell homogenates and intact cells.

Apfel CM, Evers S, Hubschwerlen C, Pirson W, Page MG, Keck W.

Antimicrob Agents Chemother. 2001 Apr;45(4):1053-7.

PMID:
11257015
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

An unusual peptide deformylase features in the human mitochondrial N-terminal methionine excision pathway.

Serero A, Giglione C, Sardini A, Martinez-Sanz J, Meinnel T.

J Biol Chem. 2003 Dec 26;278(52):52953-63. Epub 2003 Oct 7.

PMID:
14532271
[PubMed - indexed for MEDLINE]
Free Article
7.

Purification, characterization, and inhibition of peptide deformylase from Escherichia coli.

Rajagopalan PT, Datta A, Pei D.

Biochemistry. 1997 Nov 11;36(45):13910-8.

PMID:
9374870
[PubMed - indexed for MEDLINE]
8.

Characterization of cobalt(II)-substituted peptide deformylase: function of the metal ion and the catalytic residue Glu-133.

Rajagopalan PT, Grimme S, Pei D.

Biochemistry. 2000 Feb 1;39(4):779-90.

PMID:
10651644
[PubMed - indexed for MEDLINE]
9.

Zinc is the metal cofactor of Borrelia burgdorferi peptide deformylase.

Nguyen KT, Wu JC, Boylan JA, Gherardini FC, Pei D.

Arch Biochem Biophys. 2007 Dec 15;468(2):217-25. Epub 2007 Oct 5.

PMID:
17977509
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Substrate recognition and selectivity of peptide deformylase. Similarities and differences with metzincins and thermolysin.

Ragusa S, Mouchet P, Lazennec C, Dive V, Meinnel T.

J Mol Biol. 1999 Jun 25;289(5):1445-57.

PMID:
10373378
[PubMed - indexed for MEDLINE]
11.

Increased production of peptide deformylase eliminates retention of formylmethionine in bovine somatotropin overproduced in Escherichia coli.

Warren WC, Bentle KA, Schlittler MR, Schwane AC, O'Neil JP, Bogosian G.

Gene. 1996 Oct 3;174(2):235-8.

PMID:
8890740
[PubMed - indexed for MEDLINE]
12.

Determination of substrate specificity for peptide deformylase through the screening of a combinatorial peptide library.

Hu YJ, Wei Y, Zhou Y, Rajagopalan PT, Pei D.

Biochemistry. 1999 Jan 12;38(2):643-50.

PMID:
9888804
[PubMed - indexed for MEDLINE]
13.

Screening combinatorial libraries for optimal enzyme substrates by mass spectrometry.

Wang P, Snavley DF, Freitas MA, Pei D.

Rapid Commun Mass Spectrom. 2001;15(14):1166-71.

PMID:
11445898
[PubMed - indexed for MEDLINE]
14.

Structures of E. coli peptide deformylase bound to formate: insight into the preference for Fe2+ over Zn2+ as the active site metal.

Jain R, Hao B, Liu RP, Chan MK.

J Am Chem Soc. 2005 Apr 6;127(13):4558-9.

PMID:
15796505
[PubMed - indexed for MEDLINE]
15.

Inhibition and structure-activity studies of methionine hydroxamic acid derivatives with bacterial peptide deformylase.

Grant SK, Green BG, Kozarich JW.

Bioorg Chem. 2001 Aug;29(4):211-22.

PMID:
16256693
[PubMed - indexed for MEDLINE]
16.

Crystallization and preliminary X-ray crystallographic analysis of peptide deformylase (PDF) from Bacillus cereus in ligand-free and actinonin-bound forms.

Park JK, Moon JH, Kim JH, Kim EE.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Jan 1;61(Pt 1):150-2. Epub 2004 Dec 24.

PMID:
16508119
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Peptide aldehyde inhibitors of bacterial peptide deformylases.

Durand DJ, Gordon Green B, O'Connell JF, Grant SK.

Arch Biochem Biophys. 1999 Jul 15;367(2):297-302.

PMID:
10395747
[PubMed - indexed for MEDLINE]
18.

Synthesis and antibacterial activity of peptide deformylase inhibitors.

Huntington KM, Yi T, Wei Y, Pei D.

Biochemistry. 2000 Apr 18;39(15):4543-51.

PMID:
10758004
[PubMed - indexed for MEDLINE]
19.

Crystal structure of the Escherichia coli peptide deformylase.

Chan MK, Gong W, Rajagopalan PT, Hao B, Tsai CM, Pei D.

Biochemistry. 1997 Nov 11;36(45):13904-9. Erratum in: Biochemistry 1998 Sep 15;37(37):13042.

PMID:
9374869
[PubMed - indexed for MEDLINE]
20.

Energetic rationale for an unexpected and abrupt reversal of guanidinium chloride-induced unfolding of peptide deformylase.

Berg AK, Manokaran S, Eiler D, Kooren J, Mallik S, Srivastava DK.

Protein Sci. 2008 Jan;17(1):11-5. Epub 2007 Nov 27.

PMID:
18042674
[PubMed - indexed for MEDLINE]
Free PMC Article

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