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Thermococcus kodakarensis DNA replication.

Li Z, Kelman LM, Kelman Z.

Biochem Soc Trans. 2013 Feb 1;41(1):332-8. doi: 10.1042/BST20120303. Review.


An alternative beads-on-a-string chromatin architecture in Thermococcus kodakarensis.

Maruyama H, Harwood JC, Moore KM, Paszkiewicz K, Durley SC, Fukushima H, Atomi H, Takeyasu K, Kent NA.

EMBO Rep. 2013 Aug;14(8):711-7. doi: 10.1038/embor.2013.94. Epub 2013 Jul 9.


An archaeal histone is required for transformation of Thermococcus kodakarensis.

Čuboňováa L, Katano M, Kanai T, Atomi H, Reeve JN, Santangelo TJ.

J Bacteriol. 2012 Dec;194(24):6864-74. doi: 10.1128/JB.01523-12. Epub 2012 Oct 12.


Archaeal DNA polymerase D but not DNA polymerase B is required for genome replication in Thermococcus kodakarensis.

Cubonová L, Richardson T, Burkhart BW, Kelman Z, Connolly BA, Reeve JN, Santangelo TJ.

J Bacteriol. 2013 May;195(10):2322-8. doi: 10.1128/JB.02037-12. Epub 2013 Mar 15.


Affinity purification of an archaeal DNA replication protein network.

Li Z, Santangelo TJ, Cuboňová L, Reeve JN, Kelman Z.

MBio. 2010 Oct 26;1(5). pii: e00221-10. doi: 10.1128/mBio.00221-10.


Characterization of DNA primase complex isolated from the archaeon, Thermococcus kodakaraensis.

Chemnitz Galal W, Pan M, Kelman Z, Hurwitz J.

J Biol Chem. 2012 May 11;287(20):16209-19. doi: 10.1074/jbc.M111.338145. Epub 2012 Feb 17.


Histone and TK0471/TrmBL2 form a novel heterogeneous genome architecture in the hyperthermophilic archaeon Thermococcus kodakarensis.

Maruyama H, Shin M, Oda T, Matsumi R, Ohniwa RL, Itoh T, Shirahige K, Imanaka T, Atomi H, Yoshimura SH, Takeyasu K.

Mol Biol Cell. 2011 Feb 1;22(3):386-98. doi: 10.1091/mbc.E10-08-0668.


Transcriptional Repressor TrmBL2 from Thermococcus kodakarensis Forms Filamentous Nucleoprotein Structures and Competes with Histones for DNA Binding in a Salt- and DNA Supercoiling-dependent Manner.

Efremov AK, Qu Y, Maruyama H, Lim CJ, Takeyasu K, Yan J.

J Biol Chem. 2015 Jun 19;290(25):15770-84. doi: 10.1074/jbc.M114.626705. Epub 2015 Apr 30.


Comparative analyses of the two proliferating cell nuclear antigens from the hyperthermophilic archaeon, Thermococcus kodakarensis.

Kuba Y, Ishino S, Yamagami T, Tokuhara M, Kanai T, Fujikane R, Daiyasu H, Atomi H, Ishino Y.

Genes Cells. 2012 Nov;17(11):923-37. doi: 10.1111/gtc.12007. Epub 2012 Oct 18.


Thermococcus kodakarensis has two functional PCNA homologs but only one is required for viability.

Pan M, Santangelo TJ, Čuboňová L, Li Z, Metangmo H, Ladner J, Hurwitz J, Reeve JN, Kelman Z.

Extremophiles. 2013 May;17(3):453-61. doi: 10.1007/s00792-013-0526-8. Epub 2013 Mar 24.


Complete genome sequence of the hyperthermophilic, piezophilic, heterotrophic, and carboxydotrophic archaeon Thermococcus barophilus MP.

Vannier P, Marteinsson VT, Fridjonsson OH, Oger P, Jebbar M.

J Bacteriol. 2011 Mar;193(6):1481-2. doi: 10.1128/JB.01490-10. Epub 2011 Jan 7.


Understanding the enzymology of archaeal DNA replication: progress in form and function.

MacNeill SA.

Mol Microbiol. 2001 May;40(3):520-9. Review.


Archaeal DNA replication.

Kelman LM, Kelman Z.

Annu Rev Genet. 2014;48:71-97. doi: 10.1146/annurev-genet-120213-092148. Review.


Biochemical and genetical analyses of the three mcm genes from the hyperthermophilic archaeon, Thermococcus kodakarensis.

Ishino S, Fujino S, Tomita H, Ogino H, Takao K, Daiyasu H, Kanai T, Atomi H, Ishino Y.

Genes Cells. 2011 Dec;16(12):1176-89. doi: 10.1111/j.1365-2443.2011.01562.x. Epub 2011 Nov 17.


The chromosome replication machinery of the archaeon Sulfolobus solfataricus.

Duggin IG, Bell SD.

J Biol Chem. 2006 Jun 2;281(22):15029-32. Epub 2006 Feb 8. Review.


Rapid progress of DNA replication studies in Archaea, the third domain of life.

Ishino Y, Ishino S.

Sci China Life Sci. 2012 May;55(5):386-403. doi: 10.1007/s11427-012-4324-9. Epub 2012 May 27. Review.


Thermococcus kodakarensis encodes three MCM homologs but only one is essential.

Pan M, Santangelo TJ, Li Z, Reeve JN, Kelman Z.

Nucleic Acids Res. 2011 Dec;39(22):9671-80. doi: 10.1093/nar/gkr624. Epub 2011 Aug 5.


Thermococcus kodakarensis genetics: TK1827-encoded beta-glycosidase, new positive-selection protocol, and targeted and repetitive deletion technology.

Santangelo TJ, Cubonová L, Reeve JN.

Appl Environ Microbiol. 2010 Feb;76(4):1044-52. doi: 10.1128/AEM.02497-09. Epub 2009 Dec 18.


Genome sequence of the model hyperthermophilic archaeon Thermococcus litoralis NS-C.

Gardner AF, Kumar S, Perler FB.

J Bacteriol. 2012 May;194(9):2375-6. doi: 10.1128/JB.00123-12.


New high fidelity polymerases from Thermococcus species.

Griffiths K, Nayak S, Park K, Mandelman D, Modrell B, Lee J, Ng B, Gibbs MD, Bergquist PL.

Protein Expr Purif. 2007 Mar;52(1):19-30. Epub 2006 Aug 5.

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