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Monolignol pathway 4-coumaric acid:coenzyme A ligases in Populus trichocarpa: novel specificity, metabolic regulation, and simulation of coenzyme A ligation fluxes.

Chen HC, Song J, Williams CM, Shuford CM, Liu J, Wang JP, Li Q, Shi R, Gokce E, Ducoste J, Muddiman DC, Sederoff RR, Chiang VL.

Plant Physiol. 2013 Mar;161(3):1501-16. doi: 10.1104/pp.112.210971. Epub 2013 Jan 23.


4-Coumaroyl and caffeoyl shikimic acids inhibit 4-coumaric acid:coenzyme A ligases and modulate metabolic flux for 3-hydroxylation in monolignol biosynthesis of Populus trichocarpa.

Lin CY, Wang JP, Li Q, Chen HC, Liu J, Loziuk P, Song J, Williams C, Muddiman DC, Sederoff RR, Chiang VL.

Mol Plant. 2015 Jan;8(1):176-87. doi: 10.1016/j.molp.2014.12.003. Epub 2014 Dec 11.


4-Coumaroyl and Caffeoyl Shikimic Acids Inhibit 4-Coumaric Acid: Coenzyme A Ligases and Modulate Metabolic Flux for 3-Hydroxylation in Monolignol Biosynthesis of Populus trichocarpa.

Lin CY, Wang JP, Li Q, Chen HC, Liu J, Loziuk P, Song J, Williams C, Muddiman DC, Sederoff RR, Chiang VL.

Mol Plant. 2014 Oct 20. pii: ssu117. [Epub ahead of print]


Systems biology of lignin biosynthesis in Populus trichocarpa: heteromeric 4-coumaric acid:coenzyme A ligase protein complex formation, regulation, and numerical modeling.

Chen HC, Song J, Wang JP, Lin YC, Ducoste J, Shuford CM, Liu J, Li Q, Shi R, Nepomuceno A, Isik F, Muddiman DC, Williams C, Sederoff RR, Chiang VL.

Plant Cell. 2014 Mar;26(3):876-93. doi: 10.1105/tpc.113.119685. Epub 2014 Mar 11.


Characterization in vitro and in vivo of the putative multigene 4-coumarate:CoA ligase network in Arabidopsis: syringyl lignin and sinapate/sinapyl alcohol derivative formation.

Costa MA, Bedgar DL, Moinuddin SG, Kim KW, Cardenas CL, Cochrane FC, Shockey JM, Helms GL, Amakura Y, Takahashi H, Milhollan JK, Davin LB, Browse J, Lewis NG.

Phytochemistry. 2005 Sep;66(17):2072-91.


Ectopic expression of a loblolly pine class II 4-coumarate:CoA ligase alters soluble phenylpropanoid metabolism but not lignin biosynthesis in Populus.

Chen HY, Babst BA, Nyamdari B, Hu H, Sykes R, Davis MF, Harding SA, Tsai CJ.

Plant Cell Physiol. 2014 Sep;55(9):1669-78. doi: 10.1093/pcp/pcu098. Epub 2014 Jul 12.


Membrane protein complexes catalyze both 4- and 3-hydroxylation of cinnamic acid derivatives in monolignol biosynthesis.

Chen HC, Li Q, Shuford CM, Liu J, Muddiman DC, Sederoff RR, Chiang VL.

Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):21253-8. doi: 10.1073/pnas.1116416109. Epub 2011 Dec 12.


4-coumarate: CoA ligase partitions metabolites for eugenol biosynthesis.

Rastogi S, Kumar R, Chanotiya CS, Shanker K, Gupta MM, Nagegowda DA, Shasany AK.

Plant Cell Physiol. 2013 Aug;54(8):1238-52. doi: 10.1093/pcp/pct073. Epub 2013 May 14.


4-Coumarate:coenzyme A ligase in hybrid poplar. Properties of native enzymes, cDNA cloning, and analysis of recombinant enzymes.

Allina SM, Pri-Hadash A, Theilmann DA, Ellis BE, Douglas CJ.

Plant Physiol. 1998 Feb;116(2):743-54.


Functional redundancy of the two 5-hydroxylases in monolignol biosynthesis of Populus trichocarpa: LC-MS/MS based protein quantification and metabolic flux analysis.

Wang JP, Shuford CM, Li Q, Song J, Lin YC, Sun YH, Chen HC, Williams CM, Muddiman DC, Sederoff RR, Chiang VL.

Planta. 2012 Sep;236(3):795-808. doi: 10.1007/s00425-012-1663-5. Epub 2012 May 25.


Towards a systems approach for lignin biosynthesis in Populus trichocarpa: transcript abundance and specificity of the monolignol biosynthetic genes.

Shi R, Sun YH, Li Q, Heber S, Sederoff R, Chiang VL.

Plant Cell Physiol. 2010 Jan;51(1):144-63. doi: 10.1093/pcp/pcp175. Epub 2009 Dec 8.


Analysis of five rice 4-coumarate:coenzyme A ligase enzyme activity and stress response for potential roles in lignin and flavonoid biosynthesis in rice.

Sun H, Li Y, Feng S, Zou W, Guo K, Fan C, Si S, Peng L.

Biochem Biophys Res Commun. 2013 Jan 18;430(3):1151-6. doi: 10.1016/j.bbrc.2012.12.019. Epub 2012 Dec 14.


Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa.

Wang JP, Naik PP, Chen HC, Shi R, Lin CY, Liu J, Shuford CM, Li Q, Sun YH, Tunlaya-Anukit S, Williams CM, Muddiman DC, Ducoste JJ, Sederoff RR, Chiang VL.

Plant Cell. 2014 Mar;26(3):894-914. doi: 10.1105/tpc.113.120881. Epub 2014 Mar 11.


Immunohistochemical localization of enzymes that catalyze the long sequential pathways of lignin biosynthesis during differentiation of secondary xylem tissues of hybrid aspen (Populus sieboldii x Populus grandidentata).

Sato K, Nishikubo N, Mashino Y, Yoshitomi K, Zhou J, Kajita S, Katayama Y.

Tree Physiol. 2009 Dec;29(12):1599-606. doi: 10.1093/treephys/tpp069.


Clarification of cinnamoyl co-enzyme A reductase catalysis in monolignol biosynthesis of Aspen.

Li L, Cheng X, Lu S, Nakatsubo T, Umezawa T, Chiang VL.

Plant Cell Physiol. 2005 Jul;46(7):1073-82. Epub 2005 May 3.


Exogenous caffeic acid inhibits the growth and enhances the lignification of the roots of soybean (Glycine max).

Bubna GA, Lima RB, Zanardo DY, Dos Santos WD, Ferrarese Mde L, Ferrarese-Filho O.

J Plant Physiol. 2011 Sep 15;168(14):1627-33. doi: 10.1016/j.jplph.2011.03.005. Epub 2011 Apr 12.

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