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Results: 1 to 20 of 108

1.

The tandem β-zipper: modular binding of tandem domains and linear motifs.

Matthews JM, Potts JR.

FEBS Lett. 2013 Apr 17;587(8):1164-71. doi: 10.1016/j.febslet.2013.01.002. Epub 2013 Jan 16. Review.

PMID:
23333654
[PubMed - indexed for MEDLINE]
Free Article
2.

Disordered binding regions and linear motifs--bridging the gap between two models of molecular recognition.

Mészáros B, Dosztányi Z, Simon I.

PLoS One. 2012;7(10):e46829. doi: 10.1371/journal.pone.0046829. Epub 2012 Oct 3.

PMID:
23056474
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Close encounters of the third kind: disordered domains and the interactions of proteins.

Tompa P, Fuxreiter M, Oldfield CJ, Simon I, Dunker AK, Uversky VN.

Bioessays. 2009 Mar;31(3):328-35. doi: 10.1002/bies.200800151.

PMID:
19260013
[PubMed - indexed for MEDLINE]
4.

Microsecond molecular dynamics simulations of intrinsically disordered proteins involved in the oxidative stress response.

Cino EA, Wong-ekkabut J, Karttunen M, Choy WY.

PLoS One. 2011;6(11):e27371. doi: 10.1371/journal.pone.0027371. Epub 2011 Nov 18.

PMID:
22125611
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Uncoupled binding and folding of immune signaling-related intrinsically disordered proteins.

Sigalov AB.

Prog Biophys Mol Biol. 2011 Sep;106(3):525-36. doi: 10.1016/j.pbiomolbio.2011.08.005. Epub 2011 Aug 18. Review.

PMID:
21867726
[PubMed - indexed for MEDLINE]
6.

Promiscuous binding nature of SH3 domains to their target proteins.

Agrawal V, Kishan KV.

Protein Pept Lett. 2002 Jun;9(3):185-93. Review.

PMID:
12144515
[PubMed - indexed for MEDLINE]
7.

Topology-based modeling of intrinsically disordered proteins: balancing intrinsic folding and intermolecular interactions.

Ganguly D, Chen J.

Proteins. 2011 Apr;79(4):1251-66. doi: 10.1002/prot.22960. Epub 2011 Jan 25.

PMID:
21268115
[PubMed - indexed for MEDLINE]
8.

A calcium-gated lid and a large beta-roll sandwich are revealed by the crystal structure of extracellular lipase from Serratia marcescens.

Meier R, Drepper T, Svensson V, Jaeger KE, Baumann U.

J Biol Chem. 2007 Oct 26;282(43):31477-83. Epub 2007 Aug 28.

PMID:
17728256
[PubMed - indexed for MEDLINE]
Free Article
9.

The conformationally flexible S9-S10 linker region in the core domain of p53 contains a novel MDM2 binding site whose mutation increases ubiquitination of p53 in vivo.

Shimizu H, Burch LR, Smith AJ, Dornan D, Wallace M, Ball KL, Hupp TR.

J Biol Chem. 2002 Aug 9;277(32):28446-58. Epub 2002 Mar 29.

PMID:
11925449
[PubMed - indexed for MEDLINE]
Free Article
10.

Intrinsically disordered proteins: from sequence and conformational properties toward drug discovery.

Rezaei-Ghaleh N, Blackledge M, Zweckstetter M.

Chembiochem. 2012 May 7;13(7):930-50. doi: 10.1002/cbic.201200093. Epub 2012 Apr 13. Review.

PMID:
22505141
[PubMed - indexed for MEDLINE]
11.

The unfoldomics decade: an update on intrinsically disordered proteins.

Dunker AK, Oldfield CJ, Meng J, Romero P, Yang JY, Chen JW, Vacic V, Obradovic Z, Uversky VN.

BMC Genomics. 2008 Sep 16;9 Suppl 2:S1. doi: 10.1186/1471-2164-9-S2-S1.

PMID:
18831774
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Synergistic folding of two intrinsically disordered proteins: searching for conformational selection.

Ganguly D, Zhang W, Chen J.

Mol Biosyst. 2012 Jan;8(1):198-209. doi: 10.1039/c1mb05156c. Epub 2011 Jul 18.

PMID:
21766125
[PubMed - indexed for MEDLINE]
13.

The fucose-binding lectin from Ralstonia solanacearum. A new type of beta-propeller architecture formed by oligomerization and interacting with fucoside, fucosyllactose, and plant xyloglucan.

Kostlánová N, Mitchell EP, Lortat-Jacob H, Oscarson S, Lahmann M, Gilboa-Garber N, Chambat G, Wimmerová M, Imberty A.

J Biol Chem. 2005 Jul 29;280(30):27839-49. Epub 2005 May 27.

PMID:
15923179
[PubMed - indexed for MEDLINE]
Free Article
14.

Attributes of short linear motifs.

Davey NE, Van Roey K, Weatheritt RJ, Toedt G, Uyar B, Altenberg B, Budd A, Diella F, Dinkel H, Gibson TJ.

Mol Biosyst. 2012 Jan;8(1):268-81. doi: 10.1039/c1mb05231d. Epub 2011 Sep 12.

PMID:
21909575
[PubMed - indexed for MEDLINE]
15.

Pathogenic bacteria attach to human fibronectin through a tandem beta-zipper.

Schwarz-Linek U, Werner JM, Pickford AR, Gurusiddappa S, Kim JH, Pilka ES, Briggs JA, Gough TS, Höök M, Campbell ID, Potts JR.

Nature. 2003 May 8;423(6936):177-81.

PMID:
12736686
[PubMed - indexed for MEDLINE]
16.

Conserved themes in target recognition by the PAH1 and PAH2 domains of the Sin3 transcriptional corepressor.

Sahu SC, Swanson KA, Kang RS, Huang K, Brubaker K, Ratcliff K, Radhakrishnan I.

J Mol Biol. 2008 Feb 1;375(5):1444-56. Epub 2007 Dec 4.

PMID:
18089292
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Calcium binding properties of gamma-crystallin: calcium ion binds at the Greek key beta gamma-crystallin fold.

Rajini B, Shridas P, Sundari CS, Muralidhar D, Chandani S, Thomas F, Sharma Y.

J Biol Chem. 2001 Oct 19;276(42):38464-71. Epub 2001 Aug 13.

PMID:
11502736
[PubMed - indexed for MEDLINE]
Free Article
18.

The emerging contribution of sequence context to the specificity of protein interactions mediated by PDZ domains.

Luck K, Charbonnier S, Travé G.

FEBS Lett. 2012 Aug 14;586(17):2648-61. doi: 10.1016/j.febslet.2012.03.056. Epub 2012 Apr 4. Review.

PMID:
22709956
[PubMed - indexed for MEDLINE]
Free Article
19.

Amino acid changes in Drosophila alphaPS2betaPS integrins that affect ligand affinity.

Bunch TA, Helsten TL, Kendall TL, Shirahatti N, Mahadevan D, Shattil SJ, Brower DL.

J Biol Chem. 2006 Feb 24;281(8):5050-7. Epub 2005 Dec 21.

PMID:
16371365
[PubMed - indexed for MEDLINE]
Free Article
20.

Intrinsically disordered proteins may escape unwanted interactions via functional misfolding.

Uversky VN.

Biochim Biophys Acta. 2011 May;1814(5):693-712. doi: 10.1016/j.bbapap.2011.03.010. Epub 2011 Mar 31. Review.

PMID:
21440685
[PubMed - indexed for MEDLINE]
Free Article

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