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Items: 1 to 20 of 116

1.

The spatial organization of metabolism within the plant cell.

Sweetlove LJ, Fernie AR.

Annu Rev Plant Biol. 2013;64:723-46. doi: 10.1146/annurev-arplant-050312-120233. Epub 2013 Jan 16. Review.

PMID:
23330793
2.

The challenges of cellular compartmentalization in plant metabolic engineering.

Heinig U, Gutensohn M, Dudareva N, Aharoni A.

Curr Opin Biotechnol. 2013 Apr;24(2):239-46. doi: 10.1016/j.copbio.2012.11.006. Epub 2012 Dec 12. Review.

PMID:
23246154
3.

Compartmentation in plant metabolism.

Lunn JE.

J Exp Bot. 2007;58(1):35-47. Epub 2006 Oct 9. Review.

4.

Metabolic network reconstruction and their topological analysis.

Beurton-Aimar M, Nguyen TV, Colombié S.

Methods Mol Biol. 2014;1090:19-38. doi: 10.1007/978-1-62703-688-7_2.

PMID:
24222407
5.
6.

Getting to grips with the plant metabolic network.

Sweetlove LJ, Fell D, Fernie AR.

Biochem J. 2008 Jan 1;409(1):27-41. Review.

PMID:
18062772
7.

Natural strategies for the spatial optimization of metabolism in synthetic biology.

Agapakis CM, Boyle PM, Silver PA.

Nat Chem Biol. 2012 May 17;8(6):527-35. doi: 10.1038/nchembio.975. Review.

PMID:
22596204
8.

A computational analysis of protein interactions in metabolic networks reveals novel enzyme pairs potentially involved in metabolic channeling.

Huthmacher C, Gille C, Holzhütter HG.

J Theor Biol. 2008 Jun 7;252(3):456-64. Epub 2007 Oct 5.

PMID:
17988690
9.

Optimization of photosynthesis by multiple metabolic pathways involving interorganelle interactions: resource sharing and ROS maintenance as the bases.

Sunil B, Talla SK, Aswani V, Raghavendra AS.

Photosynth Res. 2013 Nov;117(1-3):61-71. doi: 10.1007/s11120-013-9889-z. Epub 2013 Jul 25. Review.

PMID:
23881384
10.

Transporters for amino acids in plant cells: some functions and many unknowns.

Tegeder M.

Curr Opin Plant Biol. 2012 Jun;15(3):315-21. doi: 10.1016/j.pbi.2012.02.001. Epub 2012 Feb 25. Review.

PMID:
22366488
11.

Organelle extensions in plant cells.

Mathur J, Mammone A, Barton KA.

J Integr Plant Biol. 2012 Nov;54(11):851-67. doi: 10.1111/j.1744-7909.2012.01175.x. Review.

PMID:
23046073
12.

Flux analysis in plant metabolic networks: increasing throughput and coverage.

Junker BH.

Curr Opin Biotechnol. 2014 Apr;26:183-8. doi: 10.1016/j.copbio.2014.01.016. Epub 2014 Feb 21. Review.

PMID:
24561560
13.

A metabolite-centric view on flux distributions in genome-scale metabolic models.

Riemer SA, Rex R, Schomburg D.

BMC Syst Biol. 2013 Apr 12;7:33. doi: 10.1186/1752-0509-7-33.

14.

Are we ready for genome-scale modeling in plants?

Collakova E, Yen JY, Senger RS.

Plant Sci. 2012 Aug;191-192:53-70. doi: 10.1016/j.plantsci.2012.04.010. Epub 2012 May 3. Review.

15.

A workflow for mathematical modeling of subcellular metabolic pathways in leaf metabolism of Arabidopsis thaliana.

Nägele T, Weckwerth W.

Front Plant Sci. 2013 Dec 24;4:541. doi: 10.3389/fpls.2013.00541. eCollection 2013.

16.

Coordinations between gene modules control the operation of plant amino acid metabolic networks.

Less H, Galili G.

BMC Syst Biol. 2009 Jan 26;3:14. doi: 10.1186/1752-0509-3-14.

17.

Revealing metabolic phenotypes in plants: inputs from NMR analysis.

Ratcliffe RG, Shachar-Hill Y.

Biol Rev Camb Philos Soc. 2005 Feb;80(1):27-43. Review.

PMID:
15727037
18.

Predicting functional associations from metabolism using bi-partite network algorithms.

Veeramani B, Bader JS.

BMC Syst Biol. 2010 Jul 14;4:95. doi: 10.1186/1752-0509-4-95.

19.

Metabolic networks in motion: 13C-based flux analysis.

Sauer U.

Mol Syst Biol. 2006;2:62. Epub 2006 Nov 14. Review.

20.

On the processing of metabolic information through metabolite-gene communication networks: an approach for modelling causality.

Szymanski J, Bielecka M, Carrari F, Fernie AR, Hoefgen R, Nikiforova VJ.

Phytochemistry. 2007 Aug-Sep;68(16-18):2163-75. Epub 2007 Jun 4.

PMID:
17544461
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