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Results: 1 to 20 of 99

Similar articles for PubMed (Select 23320864)

1.

Self consistency grouping: a stringent clustering method.

Kim BH, Chitturi B, Grishin NV.

BMC Bioinformatics. 2012;13 Suppl 13:S3. doi: 10.1186/1471-2105-13-S13-S3. Epub 2012 Aug 24.

2.

Metric for measuring the effectiveness of clustering of DNA microarray expression.

Loganantharaj R, Cheepala S, Clifford J.

BMC Bioinformatics. 2006 Sep 6;7 Suppl 2:S5.

3.

NIFTI: an evolutionary approach for finding number of clusters in microarray data.

Jonnalagadda S, Srinivasan R.

BMC Bioinformatics. 2009 Jan 30;10:40. doi: 10.1186/1471-2105-10-40.

4.

ProClust: improved clustering of protein sequences with an extended graph-based approach.

Pipenbacher P, Schliep A, Schneckener S, Schönhuth A, Schomburg D, Schrader R.

Bioinformatics. 2002;18 Suppl 2:S182-91.

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Resolving the structure of interactomes with hierarchical agglomerative clustering.

Park Y, Bader JS.

BMC Bioinformatics. 2011 Feb 15;12 Suppl 1:S44. doi: 10.1186/1471-2105-12-S1-S44.

8.

Performance comparison of gene family clustering methods with expert curated gene family data set in Arabidopsis thaliana.

Yang K, Zhang L.

Planta. 2008 Aug;228(3):439-47. doi: 10.1007/s00425-008-0748-7. Epub 2008 May 21.

PMID:
18493791
9.

A hybrid clustering approach to recognition of protein families in 114 microbial genomes.

Harlow TJ, Gogarten JP, Ragan MA.

BMC Bioinformatics. 2004 Apr 29;5:45.

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Detecting clusters of different geometrical shapes in microarray gene expression data.

Kim DW, Lee KH, Lee D.

Bioinformatics. 2005 May 1;21(9):1927-34. Epub 2005 Jan 12.

12.

Finding biologically accurate clusterings in hierarchical tree decompositions using the variation of information.

Navlakha S, White J, Nagarajan N, Pop M, Kingsford C.

J Comput Biol. 2010 Mar;17(3):503-16. doi: 10.1089/cmb.2009.0173.

PMID:
20377460
13.

A metric for phylogenetic trees based on matching.

Lin Y, Rajan V, Moret BM.

IEEE/ACM Trans Comput Biol Bioinform. 2012 Jul-Aug;9(4):1014-22. doi: 10.1109/TCBB.2011.157.

PMID:
22184263
14.

Overview on techniques in cluster analysis.

Frades I, Matthiesen R.

Methods Mol Biol. 2010;593:81-107. doi: 10.1007/978-1-60327-194-3_5. Review.

PMID:
19957146
15.

The k partition-distance problem.

Chen YH.

J Comput Biol. 2012 Apr;19(4):404-17. doi: 10.1089/cmb.2010.0186.

PMID:
22468708
16.

k-link EST clustering: evaluating error introduced by chimeric sequences under different degrees of linkage.

Bragg LM, Stone G.

Bioinformatics. 2009 Sep 15;25(18):2302-8. doi: 10.1093/bioinformatics/btp410. Epub 2009 Jul 1.

17.

Fast algorithm for population-based protein structural model analysis.

Zhang J, Xu D.

Proteomics. 2013 Jan;13(2):221-9. doi: 10.1002/pmic.201200334. Epub 2013 Jan 3.

18.

Large scale hierarchical clustering of protein sequences.

Krause A, Stoye J, Vingron M.

BMC Bioinformatics. 2005 Jan 22;6:15.

19.

Cross-over between discrete and continuous protein structure space: insights into automatic classification and networks of protein structures.

Pascual-García A, Abia D, Ortiz AR, Bastolla U.

PLoS Comput Biol. 2009 Mar;5(3):e1000331. doi: 10.1371/journal.pcbi.1000331. Epub 2009 Mar 27.

20.

MULTI-K: accurate classification of microarray subtypes using ensemble k-means clustering.

Kim EY, Kim SY, Ashlock D, Nam D.

BMC Bioinformatics. 2009 Aug 22;10:260. doi: 10.1186/1471-2105-10-260.

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